Salmo salar (Atlantic salmon): 106576838
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Entry
106576838 CDS
T04363
Symbol
mlh1
Name
(RefSeq) mutL homolog 1
KO
K08734
DNA mismatch repair protein MLH1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03430
Mismatch repair
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106576838 (mlh1)
03460 Fanconi anemia pathway
106576838 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106576838 (mlh1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106576838 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106576838
NCBI-ProteinID:
XP_014009769
UniProt:
A0A1S3N2R6
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Position
ssa18:complement(5780182..5790926)
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AA seq
725 aa
AA seq
DB search
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASTLDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLAPTPTANPNGQSRGEPVTTNDMEEMD
NAEILEEQAPGATEDEEGTSLNTPADLPRKRPRAGQDEEQEDLTAAATTRRRAIKLSSVK
ELRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLSQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLELEPGEEEQDAELNSWRWKVEHLLFKAFRSLFSPPKHFSEDGSVLQIANLPDLYK
VFERC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaggac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcaacctatggtttccgaggagaggcc
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggccgacgccaag
tgtgcttacagagccacctactgtgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcactgcggaggatctgttctataacgtgtccaccaggagg
aaagccctgaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gctatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcagac
gtcaggaccctacccaacgcctccacactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctctaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gatgtgaacgtccaccctaccaaacacgaggtgcacttcctccatgaagactgtatcatc
gagagcgttcaaaaacacatagagagcaaactcctgggctccaactcctcgcgcacgtac
ttcacacagacattgctacctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacaggggacagtgagcgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcatccaagctggcccctactcccaccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatgacatggaagagatggac
aatgcagagatcctggaggaacaggcgccaggtgccacagaggatgaggagggaaccagc
ctaaatactccagctgatctccccaggaagcgtccccgtgctggtcaggatgaggagcag
gaggacctgactgctgcagccacaaccaggagacgagccatcaagctgagcagtgtgaag
gagttgagagatgacatcgctgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcaccactctatgacctggccatg
ctggctctagactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
tcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatagaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagctagagccgggagaggaggagcaggatgcagagctgaactcg
tggcgttggaaggtggagcatctcctgtttaaagccttccggagcctcttcagtccacct
aaacacttcagtgaggatggcagcgtactccagattgctaacctaccagacctctacaaa
gtatttgagcgatgctaa
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