KEGG   Salmo salar (Atlantic salmon): 106576885
Entry
106576885         CDS       T04363                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04068  FoxO signaling pathway
sasa04136  Autophagy - other
sasa04140  Autophagy - animal
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    106576885
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106576885
   04136 Autophagy - other
    106576885
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    106576885
   04622 RIG-I-like receptor signaling pathway
    106576885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106576885
   04121 Ubiquitin system [BR:sasa04121]
    106576885
   03029 Mitochondrial biogenesis [BR:sasa03029]
    106576885
Membrane trafficking [BR:sasa04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    106576885
Ubiquitin system [BR:sasa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   106576885
Mitochondrial biogenesis [BR:sasa03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    106576885
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 106576885
NCBI-ProteinID: XP_014009888
UniProt: A0A1S3N328
LinkDB
Position
ssa02:11109391..11112644
AA seq 120 aa
MSDNAESPTETQKDEPSTPQQPTEDLGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagagtctcctacagaaacgcaaaaagatgagccttcaaccccacaa
cagcctacggaagacttggggacggcagacgagaagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcagtagagaaagggaggaca
gtgcaatcactctctcagttcatctctcgattcctcaagatggaggccaatgaacaactg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggtgtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattattgtaaatctcaagcctggggt
taa

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