Salmo salar (Atlantic salmon): 106576970
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Entry
106576970 CDS
T04363
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106576970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106576970
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106576970
03012 Translation factors [BR:
sasa03012
]
106576970
04131 Membrane trafficking [BR:
sasa04131
]
106576970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106576970
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106576970
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106576970
Translation factors [BR:
sasa03012
]
Eukaryotic type
Elongation factors
106576970
Membrane trafficking [BR:
sasa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
106576970
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106576970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
106576970
NCBI-ProteinID:
XP_014010056
UniProt:
A0A1S3N4T8
LinkDB
All DBs
Position
ssa18:complement(15521304..15534322)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagctccacatcaacattgtggtgatcggccacgtggactctggcaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgaa
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcatcaccattgacatctcactgtggaagttt
gagaccagcaagtactacgtcaccattatcgacgcccccggacacagggacttcatcaag
aacatgatcactggaacctcccaggcagactgtgctgtgctgattgtggcagccggcgtg
ggtgaattcgaggccggcatctcaaagaacgggcagacacgcgagcacgccctcctggcc
tacaccctgggggtcaagcagctgatcgtgggtatcaacaagatggactccactgagccc
aactacagccagaagcgttatgaggaaattgtgaaggaagtcagcacctacatcaagaag
attggctacaacccggatacggtagcctttgttcccatctctggctggaacggagacaac
atgctggaggccagtcctaatatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcatccgggaccaccctgctggaagctctggatgctattcagcccccgtcccgc
cccaccgacaagcccctccgcctacccctgcaggatgtctacaagattggaggtattggc
acagtgcctgtggggcgtgtggagacgggcatgatcaagccaggcatggtggtgaccttt
gcccctgttaatgtgaccactgaggtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaatgtcaagaatgtgtctgtcaaggacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagcagtcttc
actgctcaggtgatcatcctgaaccacccaggccagatcagtgctggctatgccccagtg
ctggactgccacactgcccacatcgcctgcaagtttgctgagctcaaggaaaagattgac
cgtcgctcaggcaagaagctggaggacaaccccaaggctctgaagtctggagacgccgcc
attgtggacatggtcccgggaaagcccatgtgtgtggagagcttctcagagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gttgagaagaaagccccgtccactggtaaggtcaccaagtctgcccaaaaggcccagaag
accaaatga
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