Salmo salar (Atlantic salmon): 106576979
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Entry
106576979 CDS
T04363
Symbol
fancl
Name
(RefSeq) Fanconi anemia complementation group L
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03460
Fanconi anemia pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106576979 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
106576979 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106576979 (fancl)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106576979 (fancl)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106576979 (fancl)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106576979 (fancl)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
106576979 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
106576979
NCBI-ProteinID:
XP_014010070
UniProt:
A0A1S3N413
LinkDB
All DBs
Position
ssa18:complement(16065693..16080659)
Genome browser
AA seq
371 aa
AA seq
DB search
MESLLVKESPLLLPLNKEKTVYDGFITVQERDFRIRILLPPDHQLKLAKLHCCWQLKQLL
CGYEHIVKQRLHHSPDLVSFVLELKTVLEVALKCRPECRSIPPPQYYSQLIIEMEDLGWD
KLVSIDTEFRTLRLRAEDSSGRQHVVTVKLKPKHPVEAPWCSADLPVPLAMTWTPQSSLG
HVHTQFLLLLESLAEFWAVLDEIDEKTWVLEPEKPSRADTMRRIAIANNVSIKVEVDTRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSILQNLRDVLEIEFPSPATHEKSSFS
AECGICYAYRLESAIPDQVCNDPRCGQPFHQACLYEWLRGLPSSRQSFNIVFGECPYCSK
PITVKMSTQKP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttacttgtcaaagagagtccgctgttgttaccactcaacaaggagaaaacg
gtctatgatggatttatcacggttcaggagagagacttcagaataagaatactgcttcca
ccagatcatcaacttaaactggctaagcttcactgctgctggcagttgaaacagctattg
tgtggatatgagcatatagtaaaacagagattacatcactctcctgatctagtcagcttt
gttctggagctgaagactgtcctggaagtggccctcaagtgcaggccggagtgtcgctcc
atcccccctccacagtactactctcagctcatcattgagatggaggacctgggatgggat
aagctggtgtcaattgacacggagttccgcacactgagactgagggctgaggactcctca
ggacgacagcatgtcgtcaccgtcaaactgaagcccaagcaccctgtagaggccccatgg
tgctccgcagacctacctgttccactggccatgacttggacaccacagagttctctaggc
catgttcacactcagttcctgctgcttctagagtctctggctgagttttgggcggttcta
gatgagatcgatgaaaagacctgggttctagagccagagaaacccagcagagccgacacc
atgaggaggatcgccatcgcaaataacgtgtccataaaagtggaggttgacacgcgacac
ccaaagatgttgccagagtgctgcctgcttggagcagagcatgtggtaacacctttgagg
aacaagctgaatgccaacatgcatttatggaacccggactgcagcatcttgcagaacctc
cgggatgttttggagatagaattcccatcacctgccacccacgaaaaatctagtttcagt
gcggagtgtgggatctgttacgcctaccgtctggagtcggccattcctgatcaggtgtgc
aacgaccctcgctgcggtcaacccttccaccaggcctgtctgtacgagtggttgcgtgga
ctaccttccagtcgccagagcttcaacatagtgtttggagagtgtccctactgcagcaag
cccatcacagtgaagatgtccacccagaaaccctga
DBGET
integrated database retrieval system
