KEGG   Salmo salar (Atlantic salmon): 106577067
Entry
106577067         CDS       T04363                                 
Symbol
bicc1
Name
(RefSeq) BicC family RNA binding protein 1
  KO
K18756  protein bicaudal C
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106577067 (bicc1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106577067 (bicc1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 SAM_2 KH_Vigilin KH-I_KHDC4-BBP KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 106577067
NCBI-ProteinID: XP_014010259
UniProt: A0A1S3N484
LinkDB
Position
ssa18:21956372..22037527
AA seq 989 aa
MAAQCDSLSGYLQQSDQGSNSERSTDSPVPGSEDDLSGPQALPDPEWTEERFRVDRKKLE
IMLLAATEGRVNGGEDFFQKVMDETKTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVREAK
DRIMSVLDTKQSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPGGVEAARSKIRELLPLVLSFELPAIVQPDPCSPTVQHISQTYNLTVSFK
PPTRLYGTTGVVRGSQNNSSAVKRGTAILLEHLAGSLASAISVSTHLDIAPQHHLFMMGR
NGSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGIIESVCVARQYLMGCLPLVLMFDIKE
DIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGV
SSALSPSTNGPSPTLICPVGLDILASAGLGLSSLGLLGPSAPHSLSSSPAPNSVLNSLNS
SMSPLQNPPSPSPSLWPSSLTSTQGFSSQLMMHPVAQATLSSILLSGVKGYTQNTPSPPP
GLVPIDKQTNGVPDCSKGPCTLNGHVKHPGSVYGRMSSASLADTVLNPNQCDSVQEAIVH
NQSEPRSSKSNQDEGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSGKRHAVELLQGTK
NSHLQYVCPELHSDCLLSDPESSASDGPVTDKRAPGSERAAERAAQQNERDRIRLAPHSS
FANMQVQLEALEYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRA
NHVSYKPTMSTTYEVNSDYEGSPLSLSRSGSREGVGNGSDSDNWRDRNGVGNGLANHAEF
PASVSSPKRKQNKSAAEHYLSSSNYMDCISSVSGSNGCSLQSSLKGSDLPELFSKLGLGK
YTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISGVNDYELNKNRRKLFEPP
IRSSFLEGGASGRLSRQFHADMASVSGRW
NT seq 2970 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgactctttgagcggatacttgcaacagtccgaccagggctcgaac
agcgagcgcagtactgactccccggtccccggctccgaggatgacttgagcggaccccaa
gccttaccagacccggagtggacggaggagagatttcgagtggaccgcaagaaactggaa
atcatgttattagcggcaactgagggaagagtcaatggtggcgaggatttctttcagaag
gtcatggatgaaaccaaaacacagatagcgtggccttccaaactgaagatcggagccaag
tccaaaaaagatccgcacattaaggtttgtggaaagagagacaacgtgagggaagccaaa
gaccgaatcatgtcagtcctcgacacaaagcagagtaacagggtaacccttaagatggac
gtgtcccacacagagcactcccacgtcatcggcaagggaggcaacaacatcaagaaggtg
atggaggacacaggctgccacatccacttccccgactccaaccgcaacaaccaggcggag
aagagcaaccaggtgtccattgcaggccagccaggcggggtagaggcagctcgatccaaa
atcagggagctgctccctctggttctgtcgtttgagctgccggccatcgtgcagcctgac
ccatgctcccccacagtgcagcacatctcccagacatacaacctcactgtctccttcaag
ccccccacacgtctctatgggaccaccggagtggtccgcggctcccagaacaactctagt
gccgtcaagagaggcactgccatattgctggagcacctggcgggcagcctggccagtgcc
atctcagtcagtacccacctggacatcgccccccagcaccacctcttcatgatgggccgc
aacggcagcaacatcaagcacatcacccagaggacaggagcccagatccacttccccgac
cccaacagccctcagaagaaatctactgtctacatccagggaatcatcgagtctgtctgc
gtggcgcgccagtacctcatgggctgtctaccgctggtgctgatgtttgacattaaagag
gacatcgaggtggagccccagtgtatcaccgctctgatggagcagctggatgtcttcatc
agcatcaagcccaaaccgaagcagcccagcaagtctgtgatcgtaaagagtgtggagcgg
aatgcagtgaacatgtacgaggcccggaagtttctgctaggtctggagagcaatggggtg
tcatcagccctgtccccctcaaccaacggcccctcccccactctcatctgtcccgttggc
ctggacatcctggcctcagctggcctggggctgagcagtctgggcctcctggggccgtca
gcgccccattccctcagtagctccccggctccaaactctgtcctcaacagtctgaactct
tccatgagccccttgcagaaccccccgtctccctccccctcactgtggcccagctctctc
accagcacccaaggcttctcgtctcagttgatgatgcaccctgtagcccaggccactctg
agcagtatcctgctctctggggtcaaggggtacacccagaacaccccctcccctcccccc
ggcctcgtccccatcgacaagcagaccaacggagtccctgactgctccaaaggcccctgt
accctgaatggacatgtcaagcaccctggctcagtctatggaaggatgtccagtgcatct
ctggcagacacggttctgaaccccaaccagtgtgactcagttcaggaggccatcgtacac
aaccagtcagaaccccgctccagcaagtccaaccaagacgaaggctctgacacctttgtg
gaagtgggcatgcccagaagcccatctcactcagccaatgggaacgagctaaaacagatg
ctggcttcctgtaagacgtcagggaaacggcatgcggtggagctcctccaggggaccaag
aactcccatctccagtatgtctgtccagagctacactcagactgcctcctgtcagaccca
gagtcgagtgcttcagacggccctgtgacggataagagggcgccgggcagtgagcgggca
gcagagagggcagcacagcagaacgaaagggacaggatccgcttggctccacattcctcc
tttgccaacatgcaggtacaactagaggcgcttgaatatgaacagaaaaagctgttagca
accaaagccatgttgaagaagcctgttgtgactgaggtacggaccccaactaacacgtgg
agcggtctgggtttttccaagtccatgccagcagagaccatcaaggagctgcgcagggcc
aaccacgtttcttacaaacccacaatgagtaccacctacgaggtaaactctgactatgag
ggctcccccctgtccctgtcccgctccggcagcagagagggcgtgggcaacggcagtgac
tctgacaactggagggacaggaacggggttgggaacggtcttgccaaccacgccgaattc
ccagcgtctgttagcagtcccaagaggaagcagaacaaatctgctgcggagcactatctg
agcagcagtaactacatggactgtatctcttcggtcagcgggagcaatggctgcagtctc
cagtcctctctcaaagggtcggacctgccggagctgttcagcaagctgggcctggggaaa
tacactgatgtgttccaacaacaggagatcgatctccagaccttcctcactctgacagac
caggacctgaaagagctgggcatcaccacatttggagcacgcaggaaaatgctgcttgcc
atctcaggtgtgaatgactatgaactgaacaagaaccgaaggaagctgtttgagcctcct
atcaggtcctccttcctggaagggggagccagcgggcgtctgtctcgtcagttccacgct
gacatggccagtgtcagcggccggtggtag

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