Salmo salar (Atlantic salmon): 106577075
Help
Entry
106577075 CDS
T04363
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106577075
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
Others
106577075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
Motif
Other DBs
NCBI-GeneID:
106577075
NCBI-ProteinID:
XP_014010278
LinkDB
All DBs
Position
ssa18:complement(18971116..19017974)
Genome browser
AA seq
1166 aa
AA seq
DB search
METTVGCCPHWLIAMWMCLFTLTSTLDMTKTDIRCIPSSQLSVIKPAPRELSKVGFDPFG
KGPEDEVVGVAEKSPGCHPFKSSCKKVNVAEYLARVSGDGEARSSVPESEHPFVNKSYSR
GLEERRLVDSSEVLYQHQSGSGITSKLTDRPMSPPATLNKVTVNNTRHNTINSFGRENRL
KRHALSKKKAGASLRNLRRRRKRSFQTAESRTSWSGFRWNGEDASTSVQHELKLSSSTFA
LTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGTTYEKLDEKVGP
KTILSYLYVSPNNKRKIMLLTDPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDW
ILAYSHDQKLYVSVEFGRRWQLVHDSVVPNRFYWSKLGLDKEPGMIHLETSISDRRSQYI
TCKLQNCTEANKGRPFPGFISLDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPK
YTFPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEARGLFFTLALENVVSSGGPEGNVM
IDLYEVAGIKGVFLSNKVVENEVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLH
LHLHVSDNPYTSGNIVSKESAPGIIIASGTIGPELTANNVSIFITSDAGNTWREVFEEEY
SILFLNQGGALVAIRHTPLPIRHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIM
TIFGHFSHRSEWQLVKIDFRPIFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDAR
CVKTKDQYISQMSDSCPCTEADFECDYGFERQSDGGCTAAFWFVPSSVSRDCTTGDSFLN
STGYRKALSNNCTAGTLGKYRLRRQRCPHQAPRGLQLVTSEGTLTATLGDNVTFLVFLEE
CKPVVTLVGGMSFTFYKEGTHTVTVQVSVGNTVLQDKITVAVYEYFWSHVLAFSSNLDAF
NPAVAEWRQDISRVVKDSMVQVTGINGEQLLVSVLPGLPTAAELFIVPEKRSTEGTMNRK
GTHLEQLSQVLLSALNQDLIQFTLRPGVQVNVYPTRLSPAPLVDTSESGHNGAAVIMLVS
VVFVCLAVFVIYKFKRKIPGINIYTEERSEKQQEVIPTVASIAVPNPEGDMVTSLEHLDT
GPDARGIGYLPSLTDIKLSDETPHVF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccgtcggctgctgccctcattggctcattgctatgtggatgtgtcttttt
accttaacttccaccctggacatgacaaaaacagatataaggtgcattccatcaagccaa
ctctctgttatcaagccggctccccgggaactctctaaagtgggatttgatccatttgga
aagggaccagaggatgaagttgttggggtggcagagaagtcaccaggttgtcaccccttt
aaaagcagctgtaaaaaagtaaatgttgcggaatatttagcgcgcgtctccggtgatggc
gaggcaagaagttcagtccccgaatccgagcatccgtttgtaaataaatcatacagccgt
ggattagaagaacgtcggcttgtggatagttctgaagtgctctatcaacatcaaagtggc
tcgggcatcacctccaaactcacagataggcctatgtctccacctgccaccctcaataaa
gtaaccgtcaataacactagacataatacaattaatagttttggaagagaaaatagactt
aaacgacatgcgttatcaaaaaagaaggctggggcaagtttgaggaaccttcgccgtcga
cgaaagcgcagcttccagacggcggagagcagaacatcttggtccggattccgatggaac
ggtgaagatgcgtctacctccgtgcaacatgagttgaaactcagtagttctacattcgca
ctcacgggtgattcagctcataaccaagccatggtgcattggtccggccaaaatagcagc
gtgattctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctct
ttatggaggtcaacagactatggaaccacgtatgagaaacttgatgaaaaggtcgggcca
aaaaccatactaagctacttgtacgtgagtccgaataacaaacgaaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcag
aggtaccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactgg
atcctggcttacagccacgaccagaagctctacgtttctgttgaatttggaagacgatgg
cagctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggac
aaagaaccaggaatgattcacttggagacaagtatttctgacagacgatcccagtatata
acatgtaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggtttatc
agcctggattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggc
cggcctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaag
tacacatttccaaaggacttgcagataatcagcacagatgataaccaggtggtggcagca
gtgcaggattggcaccagaatgactcctacaacttgtacatgtcagaggcccgcggtctc
ttcttcactctggccctggagaacgtagtgagcagtgggggaccagagggcaacgttatg
atagacctctatgaggtagcagggataaaaggggtgttcttgtcaaataaagttgtcgag
aacgaagtgaaaacatttatcacttacaataaggggcgagactggcgtcttctacatgca
cctaccactgatctgagcggtaccagactctactgtgtacagccctattgttcattgcac
ctgcatctccatgtgtctgacaacccgtacacgtctggaaacatagtcagcaaagaatca
gctccaggaattataatagcatcaggtaccattgggcctgagctgaccgccaataatgtc
agcattttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtat
agcatcctctttcttaaccagggcggtgccctagtggccattcgacacacacctctcccc
atcagacacatttggttgagctttgatgagggaagacactggaacaaattcagctttacc
tcctctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatg
acaatatttggccatttcagccatcgttctgaatggcagctcgtcaagattgacttcagg
cccatcttcaacagaaggtgcaccacagacgactatcagacctggcagttacacaatgac
ggtaaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccaga
tgtgtcaaaaccaaagatcagtacatctcccagatgtcagactcctgtccatgcactgag
gctgactttgagtgtgattatggctttgagaggcagagtgatggaggatgcactgctgcc
ttctggtttgttccatcctccgtgtccagagactgcaccaccggggacagcttcctaaac
tctacaggataccgtaaggctctgtccaataactgcactgcgggaaccctggggaagtac
cgccttaggagacagaggtgtccccaccaggcccccagaggtctgcagctggtcaccagt
gagggaacactcacagccaccctgggggacaacgtgaccttcctggtgtttctggaggag
tgtaagcctgtcgtgactttagtgggaggaatgtccttcaccttctacaaggagggaact
catacggtcaccgtacaagtgtcagtaggcaacaccgtccttcaagacaaaataactgtt
gcagtctatgaatatttctggtcacacgttttagcattctcctctaatctggatgccttc
aatcctgctgtggctgaatggaggcaggacatcagtagggtggtcaaggactccatggtc
caagtcacagggatcaatggagagcagcttctggtgtcagtgctcccagggttgccaacg
gcagcagagttgtttatcgtcccagagaaaaggtcaacagaggggacgatgaatagaaaa
gggacacatttagagcagctttctcaggtcctgctaagtgccctgaaccaagacctcatc
cagtttactctgcggcccggggttcaggttaacgtttaccccacacgactgtctccagct
cctctcgtggacaccagtgagagtggacacaatggtgctgcagtcattatgctagtgtct
gtagtatttgtgtgtttggcagttttcgttatctacaagttcaaaaggaagatccctggc
atcaacatatacacagaggagaggtcagagaaacaacaggaagtgatccctacggtggcg
tccatagctgtcccaaatcctgagggagacatggtgacctctttggagcacttggacaca
gggccagatgcacgtggcataggatacctgccatctctcacagacatcaaactctcagat
gaaactccccatgtgttttaa
DBGET
integrated database retrieval system
