KEGG   Salmo salar (Atlantic salmon): 106577164
Entry
106577164         CDS       T04363                                 
Name
(RefSeq) nephrocystin-1-like
  KO
K19657  nephrocystin-1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sasa03037]
    106577164
Cilium and associated proteins [BR:sasa03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   106577164
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 hSH3 NMD_SH3 SH3_3 FAM176 BUD22 Sigma70_ner Pox_Ag35 SH3_10 BSP_II RNA_pol_3_Rpc31 Cwf_Cwc_15
Other DBs
NCBI-GeneID: 106577164
NCBI-ProteinID: XP_014010451
UniProt: A0A1S3N5W2
LinkDB
Position
ssa18:complement(26259170..26282241)
AA seq 669 aa
MPPKRQGPLQTVQRVTDDIKRQVDSLIKDARLSDGLGRTEAYQSRCVHLQNLVEETTRKL
NKLTKADEPAPVGNYDQRKMEEESRLRGIEEKLLVLVLELSPPQKSEGGPHRSSQAQEDE
EEEDSEEDSEEEESEEESVEDEEEDDDDDEEDVVTKTMEQIPESGTATYMVISAFKGEQE
GDLTIQMGEVLTILSKNEDGWWLAQDSKGNKGLVPKTYLKRYSDHDEEDDEEASEDEELE
SKRKQSSNWDSVRRAITEVDATDVLSAMGAIPAGFRSSTLSKLLDEGNTYKASHYIQPEL
SQSKLSFKDLFRDPDTGKVRQRTARMSLTLTLWSCKSIPTPGVGVQVLSRHIRLCAFDGT
QVLSNIHTIRATCNANNVKTWSFSPRMTGNLPSLLDGDCFLRCNSDAPELGILFELGVTY
IRNSTGERGDLSCGWAFLKLFDTNGAPVPHRTYELLVHGGTPYEKDIEVDPSLTRGATGT
GMFQQMMLSRKLPKLFLKLKSPNVRTRSQLSALPDTLVGSLSSIHLLVLHRQLLADILLM
DRATMQNADLICSPLLATFPEIVDQSDLLDALRKSWLEAESNMKRSEKRDLPLLKRKFVR
VYMDNMYPLLYSADLPPPRWADEMVENQRARVIFNSSLEPFHTHTPDSPPRHQAFDISQL
TYDLLCMAQ
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgccaccaaaaagacaagggcctctgcaaacagtgcaaagagtgacggatgatatcaaa
agacaggttgacagtctgataaaagatgcacggctgtcggatgggttagggcgcacagag
gcatatcagagccgatgcgtacatctacaaaacttagtggaggagacaaccaggaagctc
aataagttaaccaaggccgacgagccagccccagtggggaattacgaccagaggaagatg
gaggaggaaagccgtttgcgggggattgaggagaagcttctggtcctagtcctggagctc
tctccgcctcagaaaagcgagggagggcctcataggtcatcccaagcccaggaagatgaa
gaggaggaagacagtgaggaagacagtgaggaagaggagagtgaagaggagagtgtagaa
gatgaggaagaagatgatgatgatgatgaggaagatgtagttacaaagaccatggaacaa
atcccagagtcaggcactgccacgtatatggtcatcagtgcctttaaaggagagcaggaa
ggcgatcttaccattcagatgggtgaggtcctgacgattctcagtaaaaatgaggatggc
tggtggcttgcgcaggactcaaagggcaataagggactagtccccaaaacctacttgaag
agatattcagaccatgatgaggaggatgatgaggaagcatcagaggatgaggagcttgag
tccaaaaggaagcagagctcaaactgggacagtgtgaggagagccatcactgaggttgat
gctactgatgttctgtcagccatgggtgccatccctgctgggttcaggtcatccaccctc
tctaaactactagatgaagggaatacctacaaagcaagtcactacatccagccagagttg
agccaatccaaactgtccttcaaagacctcttccgggacccagacactggaaaagttcgt
cagaggacagcgaggatgtccctcactctgactctgtggagctgcaagagtatccccacc
ccaggggtcggagttcaagttctcagtcggcacatccgcctctgcgctttcgacggtact
caggttcttagtaacatccacaccatccgagccacttgcaatgcaaacaacgtcaagacc
tggtccttttctccccggatgactgggaatctacccagccttttggatggggactgtttt
ctgaggtgcaactcggacgctcctgagctgggaatattatttgaacttggcgtcacatac
atccgaaattctacaggtgagagaggagacctgagctgtggctgggccttcctgaagctc
tttgacaccaacggagcacctgtcccacacaggacctatgaattgcttgtgcatggaggc
acaccgtatgaaaaggacatagaggtggatccgtctttaacaagaggagccacaggaaca
ggcatgttccagcagatgatgttgtcaaggaaactccctaaactcttcctcaaactgaaa
tcaccaaacgttcgcacaagatcacagctgagtgctcttccagacactctagtgggcagt
ctctccagtatacacctgctggttctacacagacaactactggcagatattctgcttatg
gacagggctaccatgcagaatgcagatctgatctgtagtcctctgctggccaccttccct
gagatcgtggaccaatcggacctgctggatgccctgaggaagtcttggttggaggctgag
agcaatatgaagagatctgaaaagagggacctaccgctgctgaagaggaagtttgtgagg
gtatacatggacaacatgtatcctctcctctactcggctgacctgccccctcctcgctgg
gctgatgagatggtggagaaccagcgggcacgagtcatcttcaacagttccctggaacca
ttccacacacacacccccgacagcccccctcgccaccaagcctttgacatctcacagctc
acctatgacctcctctgcatggcccaatag

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