Salmo salar (Atlantic salmon): 106577164
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Entry
106577164 CDS
T04363
Name
(RefSeq) nephrocystin-1-like
KO
K19657
nephrocystin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106577164
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
106577164
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Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
hSH3
NMD_SH3
SH3_3
FAM176
BUD22
Sigma70_ner
Pox_Ag35
SH3_10
BSP_II
RNA_pol_3_Rpc31
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
106577164
NCBI-ProteinID:
XP_014010451
UniProt:
A0A1S3N5W2
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All DBs
Position
ssa18:complement(26259170..26282241)
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AA seq
669 aa
AA seq
DB search
MPPKRQGPLQTVQRVTDDIKRQVDSLIKDARLSDGLGRTEAYQSRCVHLQNLVEETTRKL
NKLTKADEPAPVGNYDQRKMEEESRLRGIEEKLLVLVLELSPPQKSEGGPHRSSQAQEDE
EEEDSEEDSEEEESEEESVEDEEEDDDDDEEDVVTKTMEQIPESGTATYMVISAFKGEQE
GDLTIQMGEVLTILSKNEDGWWLAQDSKGNKGLVPKTYLKRYSDHDEEDDEEASEDEELE
SKRKQSSNWDSVRRAITEVDATDVLSAMGAIPAGFRSSTLSKLLDEGNTYKASHYIQPEL
SQSKLSFKDLFRDPDTGKVRQRTARMSLTLTLWSCKSIPTPGVGVQVLSRHIRLCAFDGT
QVLSNIHTIRATCNANNVKTWSFSPRMTGNLPSLLDGDCFLRCNSDAPELGILFELGVTY
IRNSTGERGDLSCGWAFLKLFDTNGAPVPHRTYELLVHGGTPYEKDIEVDPSLTRGATGT
GMFQQMMLSRKLPKLFLKLKSPNVRTRSQLSALPDTLVGSLSSIHLLVLHRQLLADILLM
DRATMQNADLICSPLLATFPEIVDQSDLLDALRKSWLEAESNMKRSEKRDLPLLKRKFVR
VYMDNMYPLLYSADLPPPRWADEMVENQRARVIFNSSLEPFHTHTPDSPPRHQAFDISQL
TYDLLCMAQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaagacaagggcctctgcaaacagtgcaaagagtgacggatgatatcaaa
agacaggttgacagtctgataaaagatgcacggctgtcggatgggttagggcgcacagag
gcatatcagagccgatgcgtacatctacaaaacttagtggaggagacaaccaggaagctc
aataagttaaccaaggccgacgagccagccccagtggggaattacgaccagaggaagatg
gaggaggaaagccgtttgcgggggattgaggagaagcttctggtcctagtcctggagctc
tctccgcctcagaaaagcgagggagggcctcataggtcatcccaagcccaggaagatgaa
gaggaggaagacagtgaggaagacagtgaggaagaggagagtgaagaggagagtgtagaa
gatgaggaagaagatgatgatgatgatgaggaagatgtagttacaaagaccatggaacaa
atcccagagtcaggcactgccacgtatatggtcatcagtgcctttaaaggagagcaggaa
ggcgatcttaccattcagatgggtgaggtcctgacgattctcagtaaaaatgaggatggc
tggtggcttgcgcaggactcaaagggcaataagggactagtccccaaaacctacttgaag
agatattcagaccatgatgaggaggatgatgaggaagcatcagaggatgaggagcttgag
tccaaaaggaagcagagctcaaactgggacagtgtgaggagagccatcactgaggttgat
gctactgatgttctgtcagccatgggtgccatccctgctgggttcaggtcatccaccctc
tctaaactactagatgaagggaatacctacaaagcaagtcactacatccagccagagttg
agccaatccaaactgtccttcaaagacctcttccgggacccagacactggaaaagttcgt
cagaggacagcgaggatgtccctcactctgactctgtggagctgcaagagtatccccacc
ccaggggtcggagttcaagttctcagtcggcacatccgcctctgcgctttcgacggtact
caggttcttagtaacatccacaccatccgagccacttgcaatgcaaacaacgtcaagacc
tggtccttttctccccggatgactgggaatctacccagccttttggatggggactgtttt
ctgaggtgcaactcggacgctcctgagctgggaatattatttgaacttggcgtcacatac
atccgaaattctacaggtgagagaggagacctgagctgtggctgggccttcctgaagctc
tttgacaccaacggagcacctgtcccacacaggacctatgaattgcttgtgcatggaggc
acaccgtatgaaaaggacatagaggtggatccgtctttaacaagaggagccacaggaaca
ggcatgttccagcagatgatgttgtcaaggaaactccctaaactcttcctcaaactgaaa
tcaccaaacgttcgcacaagatcacagctgagtgctcttccagacactctagtgggcagt
ctctccagtatacacctgctggttctacacagacaactactggcagatattctgcttatg
gacagggctaccatgcagaatgcagatctgatctgtagtcctctgctggccaccttccct
gagatcgtggaccaatcggacctgctggatgccctgaggaagtcttggttggaggctgag
agcaatatgaagagatctgaaaagagggacctaccgctgctgaagaggaagtttgtgagg
gtatacatggacaacatgtatcctctcctctactcggctgacctgccccctcctcgctgg
gctgatgagatggtggagaaccagcgggcacgagtcatcttcaacagttccctggaacca
ttccacacacacacccccgacagcccccctcgccaccaagcctttgacatctcacagctc
acctatgacctcctctgcatggcccaatag
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