Salmo salar (Atlantic salmon): 106577193
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Entry
106577193 CDS
T04363
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106577193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106577193
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106577193
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
106577193
NCBI-ProteinID:
XP_014010527
UniProt:
A0A1S3N556
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Position
ssa18:complement(28574603..28910188)
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AA seq
1458 aa
AA seq
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MLAEADATVPHGSGNSMMSRNNYFNKNPDSSISMSKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKKKEAQKVNNPANSQVADGTAKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKMSAYKQMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRASKYKYNGYVRSPEGATTPGKTGSQKETGVRFKADCNLVKDEVRSS
LQNPSIKISNCTAPSSCITSNAIHPQAPPRPSRHKDPLVPRDADPAVPLVNNRKGSLLPP
RMGLGLRFSISGPSRGDGTGRALAEQSRLNRARSLPVKYRYHPSNAALHDYSSSRAFEDE
HPSTLSPKKKQRNGGMRNSPNNSPNMMSRHDPLVIPGNEQMENMDMNMKQYDSTGMFHWC
PSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIV
FVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASL
QDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSSPVHGLARQASVTTGAN
IPIITELAKPGKILPLVSFSQEKKLGINIQMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALQGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLATPSQ
CTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIP
TTNRQNRSSKAREAGHKQNATRMNRMSQERKWFTDEPENAYPRNIQIKPMSTHMANQVNQ
YKSTSSLIPPIREVEDEC
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcggacgccaccgttccccatggaagcggcaactctatgatgagtaga
aataactattttaacaaaaatccggactcctcgatctctatgtccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaacaatggccagcgcatgtggtgggcattc
ctcgcctcctccatggtcacgtttttcgggggtctcttcatcattctcctgtggaggacc
ctcaaatacctgtggaccgtctgctgccactgtaacatcaaaaagaaggaggcccagaag
gtaaataaccctgctaacagtcaggtagcagacggtacagctaagggtcctgatgagaag
gacgaagtggtccctgccagcgaggtgggctggatgacctccgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggttgtgctagttttcgctctc
agcattggagcacttggaatatactttatagattcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttggcttgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagttgtggacttcttcactgttcctcctgtcttcgtatctgtctacttgaacaggagc
tggctgggtttaagattcctgagagccttgagattgatacagttctctgaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggacgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatcctcgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtttgtggtcatattacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaatagtttttctccataatatttcc
cctaatcttgagctggaagccttgtttaaacgccactttacccaggtagagttctaccag
ggatctgttctcaaccctcacgatctggccagagtcaagattgagtcagcagacgcctgt
ctgattctggctaataagtactgtccagatcccgatgctgaagacgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcagatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggtgatgat
gctatctgtctagcagagctgaaggctggcttcatagctcagagctgtctggcccagggc
ctctccaccatgctggccaacctcttctccatgaggtccttcatcgagattgaagaggac
acatggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgcgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagaagcagaaagcgc
atcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatc
gccagcgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcacgatgac
atcacagaccccaaacggatcaaaaagtgtggctgcaaacgactgatttactccaagatg
tccgcctacaaacaaatgaaactggcatgttgttttgattgcggccgttcagagcgagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacaccctacagagggcctaccca
ctctcctctgtctctgttcatgattgcgcaaccactttacgtgcctccaaatataagtat
aatggatatgtcagatcaccagagggtgctacaacaccaggaaaaacgggaagtcaaaaa
gagaccggtgttcggttcaaagcagattgcaatttagtaaaggatgaagttagatcgtct
ttacaaaacccatcaattaaaatctccaactgcaccgcgccctcctcctgcatcacatct
aacgccattcacccccaagcaccacctcgcccctcccgccacaaggaccccctggtcccc
cgggacgcggaccccgctgtacccctcgttaataaccgtaaaggaagcctgcttcctccg
aggatggggctggggctccgcttcagtatctccggtcccagcaggggggacgggaccggc
cgggccctggccgaacagagcaggctgaaccgggcccgcagcctgccggtgaaataccgc
taccaccccagtaacgcagcgctgcacgactacagcagcagcagggcctttgaagatgag
cacccgtcaactctgtcgcccaaaaaaaagcagcggaacggaggcatgcgaaactcaccc
aacaactcccccaacatgatgagcaggcatgatcctcttgtaatccctgggaacgaacag
atggagaacatggacatgaacatgaagcagtatgactccacaggaatgttccactggtgt
ccgtctaaagagatcgagaaggtcatcctgacccggagtgaggcatccatgacggtgttg
agcggccatgtagtggtctgtatatttggagatgtcacgtccgctctagtggggctgcga
aacttggtgatgcctttgagagccagcaacttccattatcacgagctgaagcccatagtg
tttgtgggctcgctggagtacctgaggagagagtgggaaaccctacacaacttccccaag
gtctccatactacctggtacgccattaagccgtgcagatttaagggctgtcaacatcaac
ctctgcgacatgtgcgtgatactgtcggccaatcagaacaatatcgacgacgcctcgctg
caggataaggaatgcattctggcgtcgctcaacataaagtctatgcagtttgacgacagc
atcgggctcttgcaggcaaactcccaaggtttcacgcctcctggaatggaccggtcctct
ccagacagcagtccagtacatggtttagcacgccaggcctctgtcaccactggcgccaac
atccccatcatcactgaactagctaaacctggcaaaatactgcctttggtttcattcagt
caggaaaaaaaacttggaatcaacatacaaatgataactgagctggtgaacgactccaac
gttcagttcctggaccaagatgatgacgatgacccggacacagagctgtacctgacacag
cccttcgcctgcggaaccgccttcgccgtcagcgtgctggactctctcatgagtgcaaca
tacttcaacgataatatcctcaccctgatccggacgctggtgactgggggagccacccca
gagctagaggctctactggctgaggagaacgccctgcaagggggctacagcacgccacag
acactggccaaccgagacaggtgtcgtgttgcccaactggccctgtacgatgggcccttt
gccgacttgggggatggtggttgctatggagatttgttctgtaaagcattgaagacatac
aacatgttgtgcttcggaatctacagattgagagacgctcaccttgccacacctagccag
tgtaccaaacggtatgtgatcaccaaccctccgtatgagtttgagttggtccccacagac
ctgatcttctgtctgatgcagtttgaccacaacgcgggccagtctcggaccagcctttcc
cacagctcccactcctcccattcctccagcaaaaagagctcgtctgtccactccatcccc
accaccaaccggcagaaccgcagcagcaaggctcgggaggctggccacaaacagaatgca
acaaggatgaatagaatgagccaagaaaggaaatggtttacagatgaaccagaaaatgcc
tacccacggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaaccaa
tacaaatccactagcagtctgataccaccaatcagagaagttgaagatgaatgctga
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integrated database retrieval system
