Salmo salar (Atlantic salmon): 106577231
Help
Entry
106577231 CDS
T04363
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106577231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106577231
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106577231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106577231
NCBI-ProteinID:
XP_014010625
UniProt:
C0HBK9
LinkDB
All DBs
Position
ssa02:11816693..11818609
Genome browser
AA seq
532 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPGEEGESDGEAGEGQVEGGLEDIPEEMEVDYSGAESV
SSIAKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELN
IIHKFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVS
VTASTTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLR
RKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVGSRSTVGGRSTVGGRSSVRDN
SSGTSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggctgtacccgggggaagagggggagagtgatggggaggcaggggagggacaggtagag
ggaggtttggaggacatcccagaggagatggaggtggactacagcggagctgagagtgtc
tcgtccattgctaaactacgcaacagcaaacagttctcagagatcatggacaaaattgca
atctatgtcgagaagcagcgcaagaactctgaagtctccggtccggtggaggcagaccca
gaatacaagctgatcgttgctgccaataacctcacagtagaaattgagaatgaactgaac
atcattcacaagtttgtacgtgacaagtattctaagaggttccctgagctggagtccctg
gtgcccaactctctggactacgtccgcactgtcaaggagctggggaacaacctggacaag
tgtaagaacaacgagaatctgcagcagatcctaaccaacgccaccatcatggtggtcagc
gtcacagcctccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggag
gaggcctgtgacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtg
gagtccaggatgtcgttcatcgctcctaatctgtcagtcatcgttggagcctcaaccgca
gccaagatcatgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaac
ctgatgctactgggaacccagaagaggaccctgtcagggttcagcagcactgctgtgctc
ccacacaccggctacatctaccactgtgatgtggtccagactctacccccggacctgagg
agaaaggcagcacgtctggtttcagcgaagtgcaccctggcatcccgagtggacagcttc
cacgagagttcagacggcaaggtgggctatgacctgaaggaggagatcgagaagaagttt
gataaatggcaggagcctccaccggtgaagactgtcaaacccctgccagcaccgttggac
ggacagaggaagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctg
acagagatcaggaaacatgccaacaggatgaccttcgcagagattgaggatgatgcgtac
caggaggacctgggtttcagtctgggccagctggggaagtcgggcagcggacgtgtcaga
caggctcaggtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctg
cagaagcagaacatgacgtatggcggcaggtccacagtcggcggcaggtccacagtcggc
agcaggtccacagtcggcgggaggtccacagtcggcggaaggtcctcggtcagagacaac
tcctcaggaacaagttccagcgtagccttcactccactacagggactggagatcgtgaac
ccgcatgcagcagagaagaaggtggctgaagccaaccagaaatacttctccaacatggca
gagttcctcaaggtcaagaaggagggagagggaaagtga
DBGET
integrated database retrieval system
