Salmo salar (Atlantic salmon): 106577330
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Entry
106577330 CDS
T04363
Name
(RefSeq) poly(A) polymerase gamma-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106577330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106577330
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106577330
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106577330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_central
PAP_RNA-bind
GH97_C
Motif
Other DBs
NCBI-GeneID:
106577330
NCBI-ProteinID:
XP_014010768
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All DBs
Position
ssa18:complement(34565398..34576567)
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AA seq
591 aa
AA seq
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MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDDILQGKTDWS
KLFQPPNFFLKYKHYIVLTASASTEENQLEWIGLVESKIRVLVGNLERNEYITLAHVNPT
SFPGNKESCSENEFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKD
GMKIEATHVKKKQLHQYLPVELVQRKKRSIVELNRNSNGGSSKRSSLDGSQLDSSRDTDS
GTPFSSPSSVCKPSRPAASDTDDSLTPPKPPVSLFVEISSSVPDVSPPRTDQAQGLSIPV
IGSKSKHSAPTGPVGRTIPTVVGRSVVSLPGSTSSTEQNQNGANRLEDQSKRLKDGAEPL
ADVLTFKEPYPPSGDGREQGDGVKVVSSPAGSTIPTVVGRSVVPCLDSSRDTTSPTEQNQ
NGATAAAKRPHSPTQDGSPKRIRDTADLLVSGDDSAFKEPFPLSSDGQEQGDGVNVESLG
GVKAMPIPTIDTSRTQRLPSMELPDVTSPLPSSNHQRVVKNSIRLALNRHR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcttcctgggtggagtctcctgggccatgctggtagccaggacctgccagctc
taccccaatgctgtggctgccactctcgtacacaagttcttcctcgtcttctccaaatgg
gaatggccgaatcctgtgcttttgaaacagcctgaagacagcaatctgaatctacctgtt
tgggatccacgagtgaacccgtcagacaggtaccacctgatgcccatcatcacgccagcc
tacccccagcagaactccacctacaacgtctccacttccacacgcaccatcatgagtgag
gagttcaaatacggtctcagtgtcacagatgacatccttcaggggaaaaccgactggtct
aaactgttccagccgcccaactttttcctcaagtacaagcattatattgttctgactgcc
agtgcatccacagaagaaaaccaattagaatggattggtctggtggagtctaagatccgt
gtcctggtggggaacctggagaggaacgagtacatcaccctggcacacgtcaaccccacg
tccttccccgggaacaaggagagctgtagcgagaatgagtttgtctccatgtggttcatt
gggatcatcttcaagaaagtggagaatgcggagagcgtcaacatcgacctgacctacgac
atccagtccttcacagatacagtttacaggcaggccaacaacatcaatatgctgaaggat
gggatgaagattgaagcgacgcacgtgaagaagaagcagctccaccagtaccttcctgtt
gagctggtgcagaggaagaagaggagcatagtggagctgaaccgtaactccaacggcggg
agttccaagcgttcctctcttgatggcagtcagctggacagttccagagacacagactcc
gggactcccttcagctcgcccagctccgtctgcaagccgtccaggccagccgcctcagac
acagacgacagtttgacaccccccaagccgccagtctctctgtttgtggagatcagctcc
tcagtgccagatgtctctccacccaggaccgatcaggcgcagggtttgtccatccccgtc
attggatcaaagtccaagcactctgccccaacgggcccagtcggtagaaccattcctaca
gtagtgggtaggagcgtggtctctctccctggcagcaccagctctacagagcagaaccag
aacggagccaacagactggaggatcagtccaagagactgaaagacggggcagagccgctg
gctgatgtcttgaccttcaaggagccgtaccctccgtctggtgacggcagggagcaaggg
gacggagtcaaagtggtgagttctccagcaggcagcaccattcctacagtagtaggcagg
agcgttgtaccctgcctggactcctctagagataccaccagcccgacagagcagaaccag
aacggagccaccgctgcagccaagagacctcactcccccacacaggacggatcccccaag
aggatacgagacactgcagatctgctggtgtccggtgatgactctgcattcaaggagccg
ttccctctatctagcgacggccaggagcaaggggacggagtgaacgtcgaaagtcttggt
ggggtaaaggctatgcctattccaactatcgacacatcaagaacacagagacttcccagt
atggagctgccagatgtgacctcccccctccccagcagtaaccaccagcgggtggttaag
aactccatcagactagccctcaacaggcacaggtaa
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