Salmo salar (Atlantic salmon): 106577378 Help Entry 106577378         CDS       T04363                                  Symbol polr3a Name (RefSeq) RNA polymerase III subunit A   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa03020   RNA polymerase sasa04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:sasa00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     106577378 (polr3a)  09150 Organismal Systems   09151 Immune system    04623 Cytosolic DNA-sensing pathway     106577378 (polr3a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sasa03021]     106577378 (polr3a) Enzymes [BR:sasa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      106577378 (polr3a) Transcription machinery [BR:sasa03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      106577378 (polr3a) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF3654 Motif Other DBs NCBI-GeneID:  106577378 NCBI-ProteinID:  XP_014010817 LinkDB All DBs Position ssa18:complement(<36321619..36341415) Genome browser AA seq 1390 aa AA seqDB search MVKEQFRETDVAQKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM GTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFHVGYFKAIIGILQMICKTCSHIMLTKE EKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTMCLNCSTLNGPVKKCGLLKILHEKYK TTKKVVDTVVSDFLNSFDIAIEHNKEVEGLLNRAQENLSPLVVLNLFRRIPAEDIPLLLM NPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRSGPEVHPGANF IQQRHTQMKRFLKYGNREKMAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDERIKIALPHPAILKPMTLWTGKQI FGLILKPSKACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDKGTLGSGSK KNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKAKQDLLDGG YAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKTNSPLIM ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF VYGGDGLDPAAMEGKDEPLEFNRVLDNIRSVHTCSEQPALSKNELVLTAESIMKRSDFKC CRDSFLEEIKKFIKATSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPSQLEKFLETCRD KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI STPIISAHLDVDDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKDNLPKVV VQGIPEVSRAVIHIDEQTGKNKYKLLVEGDNLRSVMATHGVNGNRTTSNNTYEVEKTLGI EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPTPPRRPLLFD SADFHIPLVT NT seq 4173 nt NT seq  +upstreamnt  +downstreamnt atggtgaaagagcagtttagagagactgatgtggcccaaaaaataagccacatctgtttt gggatgaagtcggctgagcagatgagacagcaggctcatatccaagtggtcagtaagaac ctgtacagccaggacaccagccatactcctctaccatacggagtactggatcatcgcatg ggcaccagtgagaaggatcgtccatgtgagacgtgtgggaagaacctggctgactgtctg ggacactatggatatctggatctggagatgccctgttttcatgtgggctatttcaaagcc atcattggaatcctacagatgatctgtaagacgtgttctcacatcatgctgaccaaagag gagaaactacagtttatggatgtgttgaagaggccaggcctagcgtacctccagaaacga ggaatgaagaagaagatatccgacaaatgccgcaaaaggacaatgtgtctcaattgctcc acgttaaatggaccagtgaagaagtgtggcttgctgaagatcctccatgagaaatacaag acaaccaagaaagtggtggacactgtagtatcagactttctcaactcattcgatatcgca atagaacacaacaaagaagtggagggcttgcttaacagggctcaggagaacctgagtcct ctggtggtgttgaacctgttcaggaggattccagcggaggacattcccctgctcctgatg aaccctgaggcaggtaagcctgcagacctcatcctcacccgtctgctggtacccccactc tgcatccgcccctctgtcatctcagacctcaagtcaggtactaacgaggatgacctcacc atgaagctcacagagatcatcttcctcaatgatgtcatcaagaagcaccgtatgtcaggg gccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctctac atcaacagtgagctctctggcatccccctcaacatggcccctaagaagtggaccagaggc ttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaagaga gtggatttctctgggagaacggtcatctctccggaccccaacctgcggatcgatgaggtg gctgtccctgtgcacgtagccaaaatcctgacctacccagagaaggtgaacaaggccaac ttggagatgctgaggaagctggtgcgtagcggtcctgaggtccatcctggagccaacttc atccagcaacgacacacgcagatgaagaggtttctgaagtacgggaaccgagagaagatg gcccaggagctgaggtttggagacgtggtggagagacacatgatcgatggagacatcgtc ctcttcaaccgacagccctctctacacaaactcagcatcatggctcatattgccaaagtg aagcctcacagaacgttccggttcaacgagtgtgtgtgcacgccgtacaacgctgacttt gacggggacgagatgaaccttcaccttccccagacagaggaggccaaggctgaagccctg gtgctgatggggaccaaagccaacctggtgacccccagaaacggagagcctctgattgct gctattcaagactttctgacaggagcctacctgttgaccctgaaggacactttcttcgat aggtctaaagcctgccagatagtggcctctatcctggtgggggtggatgagaggatcaag atagctctcccacaccctgccatactcaagcccatgactctgtggacagggaagcagatc tttggtctgatcctgaagcccagtaaggcctgtccagtcaaggccaacctgaggaccaag gggaaacagtacagtggcaaaggagaggacctctgcagcaacgactccttcgtggtgatc cagaacagtgagttgatgtgtggtaccatggataagggcacgttgggctctggctccaag aagaacatattctacatcctgctgagagactgggggcagctggaggcagccaacgccatg tctcgcctggcccgcatcgcgcctacatacctctccaatcggggtttctccatcggtatt ggtgacgtgaccccaggccagggtctgttgaaggccaaacaggacctgctggatggaggc tatgccaagtgtgacgagtacatcgaggcactgaagactggcaaactgcagcaacagcca ggctgcacggctgaggagacgctggaggccctcatcctgaaggagctatctgttatcaga gaccatgccggcagcgcctgcctcagagaactggacaaaaccaacagtcctctgattatg gctctgtgtggctccaaaggatccttcatcaacatctcccagatgattgcctgtgtgggc cagcaggctataagcggctctcgagtgcccgacggctttgagaaccgctcgctgccacac tttgagaagcactctaaacttcctgcggctaaaggctttgtggctgacagcttttattca ggcctgacgcccacggagttctttttccacactatggctggtcgagagggcttggtggac accgctgttaaaacagcagagaccggatacatgcagagacgtctggtgaagtcgttggag gacctgtgttcccagtatgatctgacggtacggagctccactggtgacatcatccagttt gtctatgggggggacggcctggacccggccgccatggaggggaaagatgaaccgctggag ttcaacagagttctggacaacatccggtcggtccatacgtgttcagagcagccagccctt agtaagaatgagttggtcctgacagcagagtccatcatgaagaggagtgacttcaagtgc tgccgagacagcttcctcgaggagatcaagaagttcatcaaggctacatctgagaaaatc aagaagaccagggataaatatggcatcaacgacaatggcaccacagagcccagagttctg tatcagttggaccgcatcactcccagccagctagagaagtttctggagacctgcagggac aagtacatgagagctcagatggagccgggctcagcagtaggagccctgtgtgcccagagc attggggagcctggcacccagatgaccctgaaaaccttccactttgctggggtagcctcc atgaacatcaccctgggggtcccacgcatcaaggaaatcatcaacgcctccaagaacatc agcacacctataatcagcgctcacttggatgttgacgacgatgcagactttggccgactg gtgaaagggaggattgaaaagacccttctgggagagatttcagagtacattgaagaggtg tttctgccagacgactgtttcattctggtcaagctgtcactggaaaggatcagactgcta cgactagaggtgaatgcagagacagtccgctactctatctgcatgtctaagctgagagtg aagcctggagacatagctgtacacggggaggcagtggtctgtgtatctcccagggaaaac agcaagagctccatgtactacgtcctccagtctctaaaggataacctgcccaaggtggtg gtacagggtatccctgaggtgtccagagctgtcattcacatcgacgagcagaccggcaag aacaagtacaagctgctggttgagggagacaacctacgcagcgtcatggcaacccacggt gtcaacggcaacaggaccacctcaaacaacacctatgaggttgagaagacgcttggtatc gaggctgctaggtccaccatcatcaatgagatccagtacaccatggtgaaccacggcatg agcatcgacaggcgacacgtcatgctcctggcagacctcatgtcctataagggtgagatc ctaggtatcaccaggtttggcctggctaagatgaaggagagcgtgttgatgctggcgtcc tttgagaaaactgccgaccatctctttgatgctgcgtactttggtcagaaggactcagtc tgtggtgtatctgaatgcatcatcatgggaatccccatgaacatcggtacaggactgttc aagctcttacacaaggctgataaggaccccacgccacccaggagacccctgctcttcgac agcgccgacttccacatccccttggttacatag

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