KEGG   Salmo salar (Atlantic salmon): 106577393
Entry
106577393         CDS       T04363                                 
Name
(RefSeq) protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106577393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106577393
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sasa02044]
    106577393
Membrane trafficking [BR:sasa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106577393
Secretion system [BR:sasa02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   106577393
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 Beta-prop_EML TPR_Sec16 EIF3I Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Prp18 Beta-prop_WDR11_1st MukF_M
Other DBs
NCBI-GeneID: 106577393
NCBI-ProteinID: XP_014010836
UniProt: A0A1S3N700
LinkDB
Position
ssa18:37277427..37287078
AA seq 1305 aa
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLDMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGMVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFKSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNR
QVQHILASANPSGKAVVWDLRKNSPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQIGMQSLCGTF
PQISSSFDTMDPFGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLIT
FESPKAPVQSPQAVPLPRQVFVSQVTTETDLLQRSRELQAALQSGSLSDYCQAKIHKAPT
DSEQDIWRFLLVNFEDEARVKFLRLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEK
IQLLSTQRSEESGDAVDSTKTPGSSSPSDFFSQIPAQPQDKEKISFQIPVSADADGLISQ
ALLVGNFEGAVDLCLNDGRYAEAILLAISGGQELLQKTQQTYLDKQRNSISMLISSVVTQ
NWGDIVQSCDLDNWKEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICS
GNIEKLVECWALQRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVAVQSPILADKLTRYAG
LLASQGSLATALSYLPDTSDQACIMMMRDRLFHAQGEGGAAWGQQPPPFPYNIVRVTGGD
PDPARAPAVPAQAKPPAQTTQTPGPYQPPLPVMPVVGQPPLPVMPVVGQPPLPVMPVVGQ
PPMTTVFTPQAVTHSRGPPPPSYGGLPPSSHAPPPSGLPRTGLRPAYPQHPATAPGLSPI
QPFQPQQQPMSAGLGGPGLSAFPPGPTMPGSSLSGHPLPPFSAPGSLATMPSPRLPPSGF
TPTSLPSGPMPPSYQQPGAPVGMYPPGGSHLHSQGPPAGPPSGPYSPLGPGYPQGGPGAP
AVKSFSAPSVAPPPTGYFPWLSTPLVDDDEGQDGWNDPPAVRGGPRKKKIVPDNYTPPAP
ITAPVMGGYPMEDHHQPQGQQGHDPSRTQQFPPGAPQEPSVQLLQALPAERVEQREIPAE
HMVLKQTFDSLVQRCQLAAQDPQTKRKLDDASKRLGYLYDKLREQTLSNNILGGLHEISR
CVAGKNYQRGLEVHTAVVTSSNFSEIQAFMPILKVVMTIANKLGV
NT seq 3918 nt   +upstreamnt  +downstreamnt
atgaggctgaaagagatccagaggacagctcatccagcatggagtcctgccccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctggacatgaagctcaag
gggtccctacctacttctaacaggctgcatagtctggtgtgggtaaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcatggtaacagtgtat
agcccagaagccattgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttaagagtaatctgttggcgtcaggg
gcaaacgattcagagatctatatctgggatctgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagctttgtgagcctcctgaagatatcagtgtagtgtcgtggaacagg
caggtccaacacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctg
aggaagaactcgcccatcatcaagattagtgaccacagcaaccggatgcactgttcaggg
atgctctggcaccctgaggtggccacacagttggtcctggcctcagaagatgaccgcatg
ccagtcattcagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagt
agtgctaaagacaacaggattctctgctggaaccccaacactggagaggtgatatatgaa
ttaccaaccaccaaccagtggtgctttgacatccagtggtgtcccaggaacccagcgctg
ctgtcggcggcctcgtttgacgggtggatcagtgtttacagcgtgatgggaggaagcctg
gaggcccagcagcagagcagggctgatcagattggaatgcagtctttgtgtggtactttc
ccacagatctcctcgtcctttgacaccatggatccgtttgggacaggccaggtgctgccc
cctctgcaagttcctcaacccacccctcagaccaccctcgtcgctccgctgaagaagccc
cccaagtgggttcgtaggcccgtaggagcctcatttgcttttggtgggaagctgatcacc
tttgagagtcctaaggctccagtccagagcccacaggccgtccctctccccaggcaggtg
tttgtgagccaagtcaccacggaaacagacctcctccaacgttccagagagctgcaggct
gctctgcaatctggatccttgtcagactactgccaggccaagatccacaaggcccccaca
gactctgaacaggacatatggaggtttctcctggtcaacttcgaagatgaagcccgggtc
aaattcctgagacttttgggtttcagcaaagaggatttagagagaaagatatccacctgc
ttggggaagaacctgcagcctaacggacatggagtggatgccaacgatctggctgagaag
atacagcttctctctactcagaggtcagaagaatccggggatgcggtcgactccaccaag
actccgggttcatcctccccctctgactttttcagtcagatcccagcacaaccacaggac
aaggagaagatcagcttccaaatccctgtctcagcagatgcagatggtctgatcagccag
gctctgctggtgggaaactttgagggagcggtggatctgtgtctgaatgacgggcgttac
gctgaggccatcctgctggctatcagtggaggacaggagctactgcagaagacccagcag
acatacctggacaagcagaggaacagcatctctatgctgatctcatccgtggtgacccag
aactggggagacatcgtgcagagctgtgacttggataactggaaggaggctctcgctgct
ctcctaacctacgctcaccccaaagagtttgctcatctgtgtgagaccctggggtcgcgt
ctggagggtgagaggacagagaaacgctgtctgcaggcatgtctctgttacatttgctct
gggaacattgagaaactagtggaatgctgggccctgcagagggactgctcatctcccctg
gttttagaggacctggtagagaagatgatggttctgcgtaagtctgtggagcgtctgagg
aacagcgaggtggctgtacagagtcccatcctggctgacaagctgactcgctatgctggt
ctcctagcttcacaaggcagcctggctacagccctgtcctacctgccagacacctcagac
caggcttgcatcatgatgatgagagaccggctgttccacgcccagggagagggaggagca
gcatggggtcaacagcccccaccgttcccttacaacatagtcagggtgacggggggcgac
cctgaccccgctcgggcccctgctgtccccgcccaagcaaaaccaccagcacagacaaca
cagacaccggggccctaccagcctcctcttcctgtgatgccagtggttggccagcctcct
cttcctgtgatgccggtggttggccagcctcctcttcctgtgatgccggtggttggccag
cctcctatgaccacagtcttcactcctcaagctgttactcactccagaggacctcctcct
ccttcgtatggtggtctgccaccctcctcccatgctcctccacctagtgggctgccacgt
acagggctacggccagcctaccctcaacatcctgccactgccccagggctctctccaatc
cagccattccagccacaacagcagcccatgtctgcaggactaggtggccccggcctctct
gccttccctccaggacctactatgccaggctccagcctgtctggacaccccctgcctccc
ttctctgcccctggcagcctcgccaccatgcccagcccaaggctacctccgtcaggcttc
acccccacctcgctcccttcaggccccatgccacccagctaccagcagcctggggcccct
gtcggcatgtacccaccaggggggtctcaccttcacagccagggcccacctgcaggtccc
ccctctggtccgtattcacccctgggacccgggtacccacaaggaggtcctggagccccg
gccgtcaagtccttctctgctccgtcggtggctcctcctcctacagggtacttcccttgg
ctgagtactccccttgttgacgatgatgaaggacaagatggttggaatgacccaccagca
gtacgagggggtcccaggaagaaaaagattgtcccagacaactacacccctcctgctccc
atcaccgcccctgttatggggggttaccccatggaggaccatcatcagccccaaggacag
cagggccacgaccccagccgtacgcagcagttccccccaggggcccctcaggagcccagt
gtacagctcctccaggcgctgccagctgagagggtggagcagagagagatccctgcagag
cacatggtcctcaagcagaccttcgacagcctggttcaacgctgccagctagccgcacaa
gacccacaaacaaaaagaaaacttgacgatgcatcgaaacgccttgggtacctgtatgac
aagctgagagagcaaacgctgtctaacaacatcctgggtggtttacatgagatcagccgc
tgtgtggcgggcaagaactaccagcgtggcctggaggtccacactgctgtggtcaccagc
agcaacttcagcgagatccaagccttcatgcccatcctcaaagtggtcatgaccatcgcc
aacaagctgggcgtctga

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