Salmo salar (Atlantic salmon): 106577532
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Entry
106577532 CDS
T04363
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106577532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106577532
Spliceosome [BR:
sasa03041
]
Complex A
Other components
Complex A specific factors
106577532
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
106577532
NCBI-ProteinID:
XP_014011117
UniProt:
A0A1S3N6T6
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All DBs
Position
ssa18:46187749..46201338
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AA seq
684 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFEAGPGAGLMPTPGPPVSFPSLPNFQPPIPNVSFPQAH
PVFAAVAAFPTPPQPPQGAGIPSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SGHNRGNNNNQPPPSRPPWMNSGQSENRNFNSMHGGHGGHGNQHGGHGNHGGHGGHGGHH
NFPPPMSNMGGHNMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPNNQ
PPPPPSGPLPPWQQQAPPPPPASSMATSAPLPWQQNTTTTSSPGSGNLPPWQQPQQSAAS
ATQPPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTM
MGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaacccctctggggaagctgcacccgagtattggcgctaaa
cgaggctttgaagccgggcccggtgcggggttaatgcctacaccggggccgcctgtttcc
tttccctcgctcccgaactttcagcccccaattccaaacgtctctttcccgcaagctcac
ccagtatttgctgcggtggccgcttttcccaccccgccacaaccaccccaaggagcagga
attccgtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggagtagc
gagacacccgaccagaagacggtcattcctggcatgcccaccgtcatcccgcctggactg
actcgggatcaggagagggcctatatagtccaactgcagatcgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccatctacaacagcgaggggaagaggctgaataccagggagtaccgcacacgcaaaaag
atcgaggaggagcgtcactccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctactagggtcaacgacaaggtgatgatcccacag
gacgagtaccccgagattaactttgttgggttgctcattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctcggtgaag
gagggcaaggtgggccgtaaggacggtcagatgctgccgggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggcggtggaacagatccgtacc
atcctgaagcagggtatcgagacccccgaggaccagaacgacctcaggaagatgcagctg
agggaattggccagactcaacggcaccctgagagaggacgacaaccggatccttcgtccg
tggcagagcactgaaccccgcagtgtcaccaataccaccctctgtaccaagtgcggtggc
gcaggccacatctcctctgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcctccccagtctgcccaggacaaggcccgtatggacaaggagtatctgtccctcatg
gctgagctaggcgaggcccctgttccctcctctggcgggggacactccaacaaccagaac
agtggtcacaacagaggcaacaacaacaaccagccaccaccgagccgtcctccctggatg
aactctggccagtctgagaacaggaacttcaacagcatgcacggaggccacggtggtcat
ggcaaccaacacgggggtcatggcaaccacgggggtcacggaggtcacggaggccaccac
aacttcccaccccccatgtccaacatgggagggcacaacatgccccccaacaatggaatg
ccacccccgtggatgcagcccccaccgccccccatgggccagggacacggacaccatatg
ggtctgctgccaccacccatgggtatgatgccaccaccacctccgccccccaacaaccag
cctcccccgccaccttcaggtcccctgccaccatggcaacagcaggcccccccaccccct
cccgccagcagcatggccactagtgcaccactgccatggcaacagaataccaccacgaca
tccagtcctggctctggcaaccttcccccctggcagcagccccaacagtccgctgcctca
gccacccagccccctccgcccatgggcaacccctccatggtcccccctccgcccggggtg
cagccccctctcccccccggtgccccacctccccctcctcccccaccccccggctcggcc
ggcatgatgtacgcccctcctccccctccgcccatggacccctccaactttgtcaccatg
atggggatgggggtggcaggcatgccccccttcggtatgccccccgcaccaccacctcca
ccccctcagaattaa
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