Salmo salar (Atlantic salmon): 106577760
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Entry
106577760 CDS
T04363
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106577760
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106577760
Surveillance factors
Other surveillance factors
106577760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
TRI4_N
Motif
Other DBs
NCBI-GeneID:
106577760
NCBI-ProteinID:
XP_014011557
UniProt:
A0A1S3N7V3
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All DBs
Position
ssa18:55867646..55898298
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AA seq
1060 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFASILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEAGFGRGAREIHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVPRKDYTRSDSENWRSLREEQEEEEEGADPGGSWRLAGARRLDDGGP
KSAGWREHDSQVEGRRRKFEFDFSGGRRRAGSEGLEDDRDGLPEWCTDEEGEMGTFDASG
AFLPISKGGKEDEFDFQGIEEEEEEEGESLSDMKRIMNGGQRVDVKESAGTSPSSSSSSS
SSPPGPLSAPPALALNPPMPQLSLTVAELEASQMANSHPVPVPVPVKASKMPSEVLEGSP
AGSSTTQQSPSTTSSLPSPPPSSSAANHLSLPPGGDTEDDEGMKHLQQEAEKMVASLQDT
SLEEESFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSM
SLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRSPPPRPQPLPPRGSAGSMDQD
RLKKQQEQAAAVLYQQLQQQQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQ
QSGGEASLWDLTMNSSTQGPTLEQLQKLQQERREAELRAKREEEEQRKRREEKRRQQEEQ
KRREEEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKSGAKGLSLLDMQ
EAERLLKQQQRAQQQQRERHQGLSMGGSSMGQWGDRGAVTGGLWGGGGGMEGKAGGGMGL
WDEAVKNQTRSSSMQGLKNSRSSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFT
TWCEQMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHF
LERRAKQKQNLQQQLSKEVAGLAMNNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQG
AMKKKKQPVVLHSDPSILGYSYHNAGERLSLNEMEMVEDY
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccggaggacatg
caggataaggagtttgcttctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctcaatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggtgttgccccagcaggcgtggcccgaggcagaggcacc
acgcgaggaggaggccgagggcgaggtcgaggcgagagtggaggattctaccaaagaagt
attgaggagggagaggcaggcttcggccgtggagccagagagatccaccgcagccagagc
tgggacgacaggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgactggtgtccctgtgcctggtgtaccgaggaaggactacacg
cggtcggacagtgagaactggcgtagcctccgagaggagcaggaggaggaggaggaaggg
gccgaccccgggggcagctggagactggccggagcacggagattagatgatggaggtcca
aagtcagcaggctggcgggagcacgacagtcaggttgaggggcgtcgcaggaagtttgag
tttgacttcagcgggggtcgcaggcgggccggcagcgaggggttagaggacgacagagac
ggactgcctgagtggtgcactgatgaagaaggagagatgggcaccttcgacgcttccgga
gccttcctacccatatccaagggaggaaaggaggatgaatttgacttccagggaatagaa
gaggaggaggaagaagagggggagagtctttctgacatgaagaggatcatgaatggagga
cagagagtcgatgtaaaggaatccgctggtaccagtccctcttcctcctcctcctcctcc
tcctctccccctggccccctctctgcccctcccgctctggctctcaacccccccatgccc
cagctgtccctcaccgtggctgagctggaggcctctcagatggccaacagccaccctgtc
cctgttcctgtccctgtcaaggccagcaagatgccaagtgaagttctcgagggctctcca
gcagggtcctccaccacccaacagagccccagcaccacctccagtctgccttcaccccct
ccctcctcctctgctgctaaccatctctccctgccaccggggggtgacactgaggacgac
gagggcatgaagcacctgcaacaggaggcagagaagatggtggcgtccctgcaggacacg
tctctggaggaggagagtttcactcagacgctgcaggagagcagaaacacagcctccgcc
ctgcccctctcccacgacgctgccatgaagtggttctacaaggacccccaggcagagatc
cagggtccattcaccaccctggagatgtgcgagtggttccaggcgggctacttctccatg
tctctgctggtgaagaggggctgtgacgagggcttccagccgctgggtgacgtcatcaag
atgtggggacgcgtgcctttcgcccctgggccctccccgccgcccctgctggtgagatct
ccaccgccacgccctcaacctctaccgccccgggggtctgctggtagcatggatcaggac
cgtctgaagaagcagcaggagcaggcagcagcagtcctctatcaacagctccagcagcag
cagcagctattccagctcatcagcaggtgcggagagcagggtattttgccttcggtgaac
aggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacag
caatcaggcggtgaagccagtttatgggacttaacaatgaattcttcaactcagggtcca
actctcgaacagcttcagaagctccagcaggagaggagagaagctgaactcagggcgaag
cgcgaggaggaggaacagcgcaagaggagggaagagaagaggaggcagcaggaggagcag
aagaggagggaggaggaggagatcttcagacgcaaacagtgtcgccagcagcaggagctg
atcatgaagctgctccagcaggccccccagcagggctcaggctccggggtggggtctggc
tggggcactgggggtctcaacaagtcaggggccaagggcctcagtctgcttgacatgcag
gaggcagagaggcttcttaaacagcagcagagagcccagcagcagcagagagaacgtcac
caaggcctgtcaatggggggttcctccatgggtcagtggggggacagaggtgctgtcacg
gggggcctttggggaggcggaggggggatggagggtaaggctgggggcggcatgggtctg
tgggacgaggcggtgaagaaccagaccagaagtagcagcatgcagggactgaagaacagc
cgcagcagcccctcactcagtgagcagtatatgctgagctgtaggaagcaacgtacggat
gaggaggacaaactgctgaagctgctgcagggcatcaagacgcctcaggacgggttcacc
acctggtgtgaacagatgctgcacgccctcaacacccaagccaacaacacctcctctcca
ctggacgtgtccaccatcgtggcgtacctgaaggaggtggagtctccctacgaggtccat
gactttatccgctcctacctgggagacaccatggaagccaaagagtttgccaagcacttc
ctggagcgccgtgccaaacagaaacagaacctgcagcagcagctatcaaaggaagtagca
gggctggccatgaacaacttccctctgccggactccatgcggggagtgagccccagcacc
ctgcagtccatgttccaggccgcccagatggggaagggagggctgtacgacacccagggg
gccatgaagaagaagaaacagcctgtggtgttgcactctgaccccagcatcttagggtac
tcataccacaacgcgggcgagcgtctgagcctgaatgagatggagatggtggaggattac
tga
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