KEGG   Salmo salar (Atlantic salmon): 106577876
Entry
106577876         CDS       T04363                                 
Name
(RefSeq) collagen alpha-6(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106577876
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106577876
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106577876
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106577876
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    106577876
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106577876
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106577876
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106577876
NCBI-ProteinID: XP_014011769
UniProt: A0A1S3N8L2
LinkDB
Position
ssa18:59723222..60008599
AA seq 1693 aa
MTFWICVLAVSWAVEATHGGTSQEPCNGLDCSGGCNCNPEKGGRGRPGALGPVGPGGPEG
FPGDQGPFGQKGEKGHVGRMGPSGLKGDQGPMGVPGFPGNDGVPGHPGQDGGRGLPGFDG
CNGTQGDPGPRALDGGIPGASGLPGPKGPKGQKGEPVYVGTIGGAPGLPGLDGVPGPGGP
DGRPGDIGPSGPEGLLGNPGPPGPPGPVGSPSLGFRGEPGDKGNTGPPGPRGVPGDEPLV
GSSITTIYKGDKGEGGYKGVRGPSGRPGLPGPFGYPGEKGENGILGYPGGRGPPGFNGPP
GSPGRQGFTGSPGFPGQPGYSGPKGDQGEQGPPGPPIYADTQGLAVQGAPGDNGIDGFPG
QPGDAGTPGFPGQPGRPGDSFGDGRGGSPGFPGTPGPKGERGNPGRQSYGPEGLPGGPGL
PGPPGPPGPPGRSVNIQPGRFDNLPGAPGRPGGQGPPGASGYKGPKGELGDCNCLGGGTT
GGVGAPGAPGADGRPGAFGRKGESGDPGIPGFGGQPGTPGRVGERGFFGRKGEKGASFYP
SFSRGIKGEQGAQGLRGPPGNMGRPGRDGLPGSPGQPGPPADVDGYGTIGERGFPGLSGA
KGRAGEPGENGIGYQGTIGPRGFPGDSGFTGLPGQPGLPGPPGDSCGQEGVNGAEGGLTL
PCRLPGEDGNPGFPGIPGRLGPKGEPGFPGGPGRPGFDGGKGERGDPGYGGQPGPQGFPG
PRGDAGGPGIPGEGRPGAPGKNGLPGRPGEKGRPGEVLGSSTGLPGPPGFPGGPGDKGEP
GASGLPGGSGFDGRSGIPGAKGERGTDGYPGTLGLPGLPGDRGNGFPGPAGPSGSKGLPG
SPGCQGYPGLKGARGDAGFPGPTGRKGQPGQPGGDGSSGLRGLPGPPGPGGRNGIPGGPG
RKGESGYPGLAGFPGMPGNPGRPGGPGGKGAPGFSGKDGLPGVFGAPGPKGDEGYRGLPG
PPALPPRVDYLEKGQRGDNGANGLPGFPGPRGDKGFPGQPGRQGLPGLPGYADRAKGEPG
LPGLPGRPAGPGYPGPKGSPGIIGFPGMPGPRGDDGRPGFPGNPGVPGQPGAKGERGDSS
GYPGSPGAKGESGTPGYPGGQGANGAPGDNGFPGGPGFSGQKGAPGVPGRPGLLGTPGFT
GAKGLNGYPGGRGLDGTTGRPGSPGSSGEKGLPGSPGLDGLNGLAGPKGIPGTPGYSEEG
RPGTPGAAGLKGERGSSIPGPPGYNAEKGARGESGGAGMTGFPGLPGRRGETIGSNIPGP
LGDPGLPGLDGEEGYGGPPGPPGPPGPSTAQGDRGDAGLPGFPGTPGRRGDPGGPGGPGR
EGSPGFNGERGDSGYSGVSGTKGYPGDPGYYGGKGPKGRKGSSGRKGAPGITLPPPIFQT
PYGEVGGPGLNGAPGAMGEPGNPGIPGRGGPKGRPGAVGKLGRNGGSGLNGPLGDPGSPG
FPGPSGSQGLPGKPGLQGPPGSVARSRSVGFTLVKHSQNNQVPMCPQGMSRLWEGYSLLY
VEGQEKAHNQDLGMAGSCLPRFSTVPFLYCTPNEICYYASRNDKSYWLSTTAPIPMMPVG
EEAISQYISRCSVCEAMSQAVAVHSQDLTIPTCPAGWRSLWIGYSFLMHTAAGAEGGGQS
LVSPGSCLEDFRATPFIECNGAKGTCHFFANKYSFWLTTVEPSREFNPPPMDTLKGGNQL
SRVSRCQVCSKIL
NT seq 5082 nt   +upstreamnt  +downstreamnt
atgacattctggatttgtgtacttgctgtcagctgggcagttgaagcgacacacgggggg
accagccaggagccctgtaatgggctggactgtagcggaggatgtaactgtaacccagag
aaaggtggcagggggcgtccaggggcattggggccagtaggacccggtggaccagagggg
ttcccaggcgaccaagggcctttcgggcaaaaaggagagaagggccacgtcggacgcatg
ggcccctctgggctgaaaggagaccaggggcccatgggcgtcccagggttcccaggaaac
gacggagtcccaggtcacccaggtcaggacggtggcaggggtctaccagggtttgatggc
tgtaacggtacccagggagacccaggtcccagagctctagacggaggaatacctggagct
tcaggactccctgggcctaaaggtcctaaagggcagaagggagaacctgtatatgttgga
accatagggggagctcctggtttgcctggactggacggtgtacctggtcctggaggtcct
gacggaaggcctggtgacatcggccccagtggtcctgaaggattacttggcaatccaggt
ccccccggtccccctggtcctgtagggagccccagcctaggcttccggggggagccagga
gataagggcaacacgggtccacccggacctcgaggcgtgcccggcgacgagccgctagta
ggctcatctattaccactatctacaaaggagataagggggaagggggttacaaaggagta
cgtggaccatctggtagacccggcctacctggtccttttggctatcctggcgagaaggga
gagaatggaattctggggtatccagggggacggggtcctcctggttttaatggacctccc
ggatctcctggaagacagggattcacaggcagtccggggttccccgggcaaccaggttac
agtggacctaagggtgaccagggggaacaggggcctcccggaccccccatctacgcagac
acacaagggctggctgttcaaggagcaccaggtgacaacggtatcgacggcttccccggc
caaccaggtgacgctggcactccagggtttccaggacaaccaggacgaccaggcgactcc
ttcggcgatggtcgaggaggcagcccagggttccctggtaccccagggcctaagggagag
aggggtaaccccggcagacagagttacggccctgagggcctaccaggaggaccaggctta
ccaggaccccctggacctcccggaccaccaggcagatctgtcaacatccagcccggcagg
tttgacaatctaccaggagcgccaggacgaccaggaggccagggaccacctggagccagc
ggatacaaaggacccaaaggggaactgggtgactgtaactgcctgggaggaggcaccacg
ggtggggtgggagcaccgggggctcctggggctgatggaagacctggggccttcggcagg
aagggcgaaagcggagacccaggcatacccggtttcggaggacaaccaggaacacctggc
cgtgtgggcgagaggggtttctttgggcgtaaaggagaaaagggtgcctccttctacccc
tcgttcagccgagggatcaagggtgaacagggggcccagggccttcgagggccccctgga
aacatgggtcgacccgggagagacggacttcctgggtcccccggacagcctgggcctcct
gctgatgttgatggctatggaaccattggagagagaggattcccagggttgtcaggcgcc
aaaggtcgcgccggtgaacctggagagaacgggattggctaccagggtaccatcggcccc
cgtgggtttccaggcgactcgggctttacggggttaccagggcaacctggtttacctggc
cctccaggtgacagctgtgggcaggagggggttaatggcgcagagggagggctaacgcta
ccatgtcgtctacctggtgaggatggaaaccccggcttccccggaatacctggaagacta
ggtcccaagggcgagccaggtttcccaggtggtcccggtcggcccggttttgacggaggg
aagggagagagaggagacccaggttacgggggccagcctgggccacaaggtttccctggc
cccagaggagatgcggggggcccaggtattccaggcgagggtcgtccaggggccccaggg
aagaacgggctcccggggcggccgggggagaagggccggccaggggaggtgctggggtcc
tcaacagggctccctggaccacctgggttcccaggaggaccaggagacaagggagagcca
ggagcatcaggacttcccggaggatcaggttttgatggtcggtcgggcattcccggagct
aagggtgagcgcggtacggatggctaccccggaactctaggtcttcccggacttcctgga
gacagaggcaatggatttcccggtcctgctggaccatccggaagcaaaggattacccgga
tctccaggctgtcaaggctaccccggtttaaaaggagccagaggtgacgcgggcttccca
ggcccaactgggaggaaggggcaaccagggcaaccaggaggggatggatcatcaggactc
aggggccttccgggaccaccgggccccgggggaagaaacggcatccctgggggaccagga
aggaagggcgagagcggttaccctggactggcaggtttccccggaatgccaggtaaccct
ggaagacccggtggaccaggaggtaaaggagctccggggttctcaggaaaagacggcctg
cccggtgtcttcggagcgccaggacctaaaggtgacgaaggttaccgtggtctccctggc
ccacccgctctgccccccagagtagattacctggagaagggacagaggggcgataacggt
gccaacggactacccggtttccctggacctagaggtgacaagggtttcccaggccagcct
ggtcgtcagggtttgcccggactgcctggttatgctgacagggctaaaggagaaccagga
cttcccggtctccccggacgcccagccggtccaggctacccaggccctaaaggatctccc
ggtatcatcggcttccctggcatgcctggaccaaggggtgacgatggcaggcctggtttc
cctggtaaccccggagtccctggtcagccaggtgctaaaggggagagaggtgactcgtcc
ggctaccccggaagtcccggagctaaaggtgagtccggaacccccggttacccaggtggc
caaggtgctaatggcgcccccggcgacaacggtttcccagggggccctgggttcagcgga
cagaagggagcaccgggagttcctggaagacctggactcttgggtacccctggtttcact
ggggctaagggtctgaacggatacccaggaggaagaggtctcgacgggacaactggccgc
cccggctcccctggatcatctggagaaaaaggtctgccgggatctcctggtcttgatgga
ctcaacggactggctggaccgaagggtataccaggaaccccgggttatagtgaggagggt
cgccccggcacccctggagcggccggtctgaagggagagaggggatcctccatcccagga
cccccgggatacaacgcggagaagggagcgagaggagagtcagggggtgctggtatgaca
ggcttcccaggtctgcctggtcgtcgtggggagacaatcggctccaatatccctggacct
ctgggagacccaggcctgcccggactcgatggagaagaaggttacggtggtcctccaggc
cccccaggcccaccggggcccagtacggcccagggagacagaggtgacgctgggctacct
ggcttccccggtacccctgggagacgtggagatcctggaggtcccggtggcccaggaagg
gaaggcagccctggattcaatggagagagaggcgactctgggtacagtggagtgtcagga
accaaaggctaccctggagatccaggatattacggagggaaaggacccaaaggaaggaaa
ggttcttctggtcgtaagggggccccaggtataactttaccccccccgatcttccagact
ccctacggagaagtgggaggccctgggctcaacggcgctccaggggccatgggagaacca
ggcaatcctggcattccaggcagagggggtcctaaaggaaggcccggtgcggtggggaag
ctggggaggaacggagggtcaggtctgaatggacctctgggagaccctggttctcctggt
ttccctggaccttccggatcacaaggtctgcctggtaagcctggtctgcagggtcccccc
ggcagtgtggcccgcagcaggagtgttggtttcaccctggtgaaacacagtcagaacaac
caggtacccatgtgtccccagggcatgtcccggctctgggagggatacagtctgctgtac
gtagaggggcaggagaaggcacacaaccaggacctcggtatggcgggctcctgcctcccc
cgtttcagcactgtccccttcctctactgcacgcccaacgagatctgttactacgccagc
cgcaacgacaagtcctattggctgtccaccactgcgcccatccccatgatgccggtggga
gaggaggccatcagccagtacatcagcaggtgctccgtgtgcgaggccatgtcccaggct
gtggctgtccactcccaggacctcaccatccccacctgccctgctggctggaggtctctc
tggatcgggtactccttcctcatgcacacagctgccggggctgagggcggaggccagtcc
cttgtttcacccgggtcctgtctggaagacttccgtgcaactcccttcatcgagtgtaac
ggggctaagggcacctgccacttctttgccaacaagtacagcttctggctgaccacggtg
gagcctagccgggagttcaacccccctccgatggacacgctgaagggaggcaaccaactg
agcagagtcagtcgctgtcaggtctgcagtaagatcttgtag

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