Salmo salar (Atlantic salmon): 106577905
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Entry
106577905 CDS
T04363
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106577905
03012 Translation factors [BR:
sasa03012
]
106577905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106577905
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106577905
mRNA cycle factors
Stress granule specific factors
106577905
Translation factors [BR:
sasa03012
]
Eukaryotic type
Initiation factors
eIF-4
106577905
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106577905
Exosomal proteins of bladder cancer cells
106577905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
UvrD-helicase
AAA_22
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
106577905
NCBI-ProteinID:
XP_014011820
UniProt:
A0A1S3N962
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All DBs
Position
ssa18:complement(61004809..61015374)
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AA seq
407 aa
AA seq
DB search
MSAEYEDRPPRDNGPEGMEPDGIIESNWNEIVDSFDEMNLGEKLLRGIYAYGFEKPSAIQ
QRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDMELKGTQALVLAPTRELAQQIQKV
ILALGDYMGASCHACIGGTNVRNEVTKLQAEAPHIVVGTPGRVFDMLNRKYLASKNIKMF
VLDEADEMLSRGFKDQIYEIFQKLPTSTQVVLLSATMPQDVLEVTKKFMREPIRILVKKE
ELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV
SALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR
IGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgagtatgaagatagacctcccagagacaatggcccagagggcatggagcca
gatgggatcattgagagcaactggaatgagatagtggacagttttgatgagatgaacctg
ggcgagaagctgctcaggggaatctatgcctatggttttgagaaaccctctgctatccag
cagagggccatcctcccttgtatcaagggttatgatgtgattgcacaggctcagtctggt
actgggaagactgcgacctttgccatctccatcctgcagcagattgacatggagctgaag
ggcacacaggccctggtcctggctcccaccagagagttggctcagcagatccagaaggtc
atcctggccctgggtgactacatgggagcctcctgccatgcctgtattggagggaccaac
gtccgtaacgaggtcaccaagctgcaggctgaggcccctcacatagtggtggggacccct
ggtcgtgtgtttgatatgttgaaccgcaaatacctggcctccaagaacatcaagatgttt
gtgctggatgaggctgatgagatgttgagtcgtggtttcaaggaccagatctacgagatc
ttccagaagctccccaccagcacgcaggtggttctgctgtctgccaccatgccccaggat
gtcctggaggtcaccaagaagttcatgcgtgagccaatccgcatcctggtcaagaaggag
gagcttaccctggagggtatccgccagttctacatcaatgtggagaaagaggagtggaag
cttgacaccctgtgtgatctctatgagaccctgacaatcacccaggctgtgatcttcatc
aatactaggaggaaggtggactggctcactgagaagatgcatgccagggatttcactgtg
tccgctctgcacggagacatggaccagaaggagagggacttgatcatgagggagttccgt
tcaggctccagcagggttctcatcaccactgacctgctggccagaggtattgatgtccag
caggtgtccctggtcatcaactatgatctgcccaccaatagggagaactacatccacagg
attggtcgagggggtcgttttggccgcaagggagttgccatcaacatggttactgaggag
gacaagcgcacgctgagggacatcgagacattctacaacaccactgttgaggagatgccc
atgaacgtggctgacctcatctag
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