Salmo salar (Atlantic salmon): 106577910
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Entry
106577910 CDS
T04363
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106577910
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106577910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
TPR_NPHP3
SH3_1
SH3_9
TPR_14
TPR_10
Motif
Other DBs
NCBI-GeneID:
106577910
NCBI-ProteinID:
XP_014011825
UniProt:
A0A1S3N967
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All DBs
Position
ssa18:complement(61100906..61120445)
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AA seq
1350 aa
AA seq
DB search
MMSTAEQEVEPVAVVNRMDTSTRRYRRELSAEDHNHDPVKKGTRSRKMERSSSRGAGTSE
DGFPAALPMLLAMVEGPDKLPADEGSQEVLRGKLRLLEADSIEVNALFMELSARLVSISC
EENAIFVTFKTFEEIWRFTTYYTMGFLGQCMENLLLDQDFWLSSLDQEYFAIEISIQEET
LNLMYKGILMQEGSLFASCSSTQMFDSSTSGRDLYLEQGDIALFEPPFLGSGWTVLSLGD
GARGTKPKPALEPVIPFHQWFLKSCAENILVGSGKPACDFPCQFATGSCVATVEYDAGGP
DELSLEQGDRIIIVGLLVSCFEWFTGRLERTGEVGLVMTTLVRPADSLCEASDIFLEKEE
RLFFNLKEDQIKEETIALLKKINQNDVGHVYKLDLIAQPDSPNEPTQNGSQGNMDAHQQA
ELRRKIEEILLKGKMKSKVPHATVTTNGTLEDHSETSKTTLPSGPHFTIQPVEEGTTTNQ
EKFLPLLSFLSGSNYKPEFGALYGQTPERLLSTFTGHLDDVDKLVAYLGVARETARKKRL
HWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSVPRDGFTDMLMLASIYANLAVIYLMQK
NTEKYLALSERIAALLMGIPYCVSTVEKDSEVLKFILKKAVLSHNKMAEARACFLLAKLH
WRRGEAADTVPFLERLLVLLAEPPGVRSVVPSHGYLSLGRLYSQLSLPHLCVSSARRATM
HSSARLADCLNGMGLVLENTARLYGIRKQDVAIPAQVAPYLSQSLSFTGRLDGVGGTGDH
TLSQALTLCLSQLFQEHGMLGHAVRSMHTLIDHHRAPSSSSGTTSIPERNIALVWLAWLH
ICNSQPEVSLDILDSVLASMPEHCTTPQEGLVHNMRGVALRSTGDLRRAAESYQTAIDVC
EEFEDRANWAVAEANLGLLCLKAGAKRLAEQHLTEAVEMLSALEGQEHEVNFTTVLLELG
QYYVNQRHLDRGKIYYEWALLMAIKSNHSDSQLSVTRRLCHLYRAVCPDEAQCIIYNEHQ
LALLVSRGDRRQEGEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRREKEAYAW
LQAGKIYHLLGQTELVDLYLQVAQDVGVSTGDTHFILQLLEAAGDIFFNSSTEREKAVCF
YGDRALPIAVRTSSTEVRLRLSNKLVELLLQMKLYGEAVEYAQTALDISVKLGNRLNERV
AFHRLATLYHCLGQFELAEHYYLKALSLCPTPLEFDEETLYYVRVYRTLGDIIFYDLKDP
YDAAGYYHLGLAAAMDIGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNV
RRINLSPDQIFSSMSQYKMNRVNIQEPRNK
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaccgcggaacaagaggtggaaccggtggcggtggttaaccgtatggacact
agcactcgccgttaccggagagagctctcagcagaagaccacaatcatgatccagtaaaa
aaagggaccagaagtagaaaaatggagcgctccagctccagaggagcaggcacatccgaa
gacggcttcccagcagcgctgcccatgctgttggccatggtggaggggccggacaagctt
cctgcagacgaggggtcacaggaagtgctgcgggggaaactccgcctcctggaggccgac
agcatagaggtcaacgctctcttcatggaactatcagctcggcttgtttccatcagctgt
gaagaaaatgccatatttgtcacattcaaaacatttgaagagatatggaggttcaccacg
tattacacaatgggctttctgggtcagtgcatggagaacctgctgttggaccaggacttc
tggttgagttctctggaccaggagtactttgccatagagatctctatccaagaggagact
ctcaacctcatgtacaaaggcatcctcatgcaagagggttccttgttcgccagctgcagc
tccacccagatgttcgacagctccacctctgggagagacctctacctggagcagggggac
atcgccctgtttgagcccccgttcctgggctcggggtggactgtactctccctgggggat
ggagcccgggggaccaaacccaaaccagccctggagcccgtcatccccttccaccaatgg
ttcctcaaatcatgtgcggagaacatcttagttggcagtggcaagccagcatgtgatttc
ccctgccagtttgccactggctcctgcgtggccactgttgagtatgacgccggtgggcca
gacgagctgagcctggagcagggggatcgcatcatcattgtgggcctgttggtgtcgtgc
ttcgagtggttcactggcagactggagaggacaggagaagtgggattggtgatgacaaca
ctggtcagaccggccgatagcctttgtgaggcgtctgacattttcctagagaaagaagag
aggttgtttttcaacctgaaagaagatcagattaaagaggagacaatcgccttgctgaaa
aaaatcaaccagaatgatgttggacacgtctacaaacttgatctgattgctcaaccggat
tctccaaatgaaccaactcaaaatggttcccaaggcaacatggacgctcaccaacaagca
gaactgaggaggaagattgaagagattctgctaaaagggaagatgaaatcgaaggtgcct
catgcaactgtgacgacaaacggaactctggaggaccacagtgagacctctaagactaca
ttacccagcgggcctcacttcaccatccaaccagttgaggaaggcaccaccaccaaccag
gagaaattccttcctcttctatccttcctgagtggcagcaactacaagccagagtttggc
gccctctatggccaaactccggaacggctcctctccactttcactggccacttggacgat
gttgacaaattggtggcgtatctaggtgttgccagggaaactgccaggaagaagcgactc
cattggtcccagagccgcctctgtttccttttggggaaactctgcgcaggacgatcaaaa
ttttcccaggctcgagtctacttcgaggaggcccttagcgtccctcgagacggcttcacg
gacatgctaatgctagctagcatctacgctaacctagcagtgatctatctcatgcagaaa
aatacagaaaaatacttggctctgtcggagcggatcgctgcgctgctaatgggcatccct
tactgcgtctcgacagtggagaaagactcagaagttctgaagtttatcctgaaaaaggcg
gtgcttagtcacaacaagatggcagaagccagagcatgcttcctcttggccaagctccac
tggaggcgaggtgaggcagcggacaccgttcccttcctggagaggcttctggttctcttg
gcggagccccctggtgtccggagcgtcgtgcccagccatggctacctcagcctggggagg
ctgtacagccagctctccctcccccacctctgtgtcagctcggccaggagagccacgatg
cattcatctgctaggctagctgattgtctgaatggaatggggctggttctggagaacaca
gccagactctatgggatccggaagcaggacgtcgccattccggctcaagtcgctccatat
ctcagccagtcactctccttcactgggcgattagatggagtcggtggcactggtgaccac
actctaagccaggctctaacactctgcctatcccagctgtttcaggaacatgggatgcta
ggtcacgccgtacgctccatgcacactctcatagaccatcatcgtgcgccgtcatcatca
tcgggcaccactagcattcctgaacgaaacatcgcccttgtgtggctagcatggctccac
atctgtaacagccaaccagaggtatcgctagacatcctcgactcagtgctggcctccatg
ccagaacattgcactaccccacaggaaggactggtccacaacatgaggggtgtagccttg
cgaagcacaggggacctgaggagggcagcagagagctaccagacggccattgatgtgtgt
gaggagtttgaggacagggctaactgggcagtagcagaagctaacctggggttattgtgt
ctgaaggctggggctaagaggttagcggagcagcatctaacagaagctgttgagatgttg
tcagcgctggagggacaagaacatgaggtgaactttaccacagtgctgttggagctggga
cagtattatgtgaaccagagacacctggacagaggaaagatctactatgaatgggctcta
ctcatggctatcaaatcaaaccactcagacagtcagttgagcgtgacgcgacgcttgtgc
cacctttacagagcagtgtgtccggatgaggcccagtgcatcatctacaacgaacatcag
ctggccctgctggtgagccggggggacaggagacaggagggggaagtgttggagaccatc
agccagctataccttagtctggggacagagagggctaggcggtctgctctggactacacc
aagcgtagcctgggtatcttcatagacctgggccggagggagaaggaggcttacgcctgg
ttacaggctgggaagatataccacctgctgggccagactgaactggtggacctttattta
caggtggcccaagatgtgggtgtgagtacgggagacacacacttcatcctacagctgctg
gaggctgcaggggacatcttcttcaacagctcaacggagagagagaaggctgtctgcttc
tatggggaccgtgccctgcccatcgcggtgagaaccagcagtacagaggtcagactgaga
ctgtctaacaagctggtggagctgctgctgcagatgaagctgtatggagaggctgttgag
tacgcccagaccgccctggacatcagtgttaaactgggaaaccgtctgaacgagcgtgtg
gcgttccaccgcctggctactctgtaccactgtctgggtcaatttgagctggctgaacac
tactacctgaaggccctttccctctgccccacgcccctggagtttgatgaggaaaccctg
tactatgtcagggtgtatcggacgctgggggacattatattctatgatctgaaggacccg
tacgacgccgcagggtactaccacctaggacttgctgcagccatggacatcggcaacaag
aagtcccagctccagctctgcacccgattggctaccatctaccacaacttcctggtcgat
cgggaactgtccctcttcttctaccagaaagcacgagcgttcgcctccgacctcaatgta
cgacgcatcaacctctcgccagaccagatcttcagcagtatgtcacagtacaagatgaac
agggtgaacatccaggaaccaagaaataagtaa
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