Salmo salar (Atlantic salmon): 106578414
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Entry
106578414 CDS
T04363
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09380
zinc finger homeobox protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106578414
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
106578414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
Homeobox_KN
zf-C2H2
zf-C2H2_jaz
zf-Di19
zf-met
Zn_SUZ12
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
106578414
NCBI-ProteinID:
XP_014012637
UniProt:
A0A1S3NB44
LinkDB
All DBs
Position
ssa19:9689563..9712609
Genome browser
AA seq
2537 aa
AA seq
DB search
ILFSVFTFLSEEPCDDEAPLPPRSSSRPGLNDRELADREHRVNSLSKESPGSNAVGKRSM
LPERQNDSPPKRPKSAEGKTSVSEQVQQCPYCNYSSKDANRIQLHVVSQHSMQQPVISCP
LCQDVLSNKIHLQLHLTHLHSVAPDCVEKLLMTVAGPDVMVPNNMMHPSPGQDNALSLMD
SSAVLSEKYRKPTGNSSKEEMNSTGQGKSELDLHGEELKPPKDGSDAPDWKRSVVVGQDR
KSPDSLQDHLNDLQRCQQQQQQLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQYHAIRAA
TMCSLCQRSFRTFLALRKHLENGHPELSEAEVQQLCGSLPVNGDFLSESEARAYEEAQQA
FEQEMEKDDELDLEEKASPTGSDSSSLLDDMGAETKRTLPFRKGPNFTMEKFLDPSRPYK
CTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPAETNSNVDNKPFKCNICNVAY
SQSSTLEIHMRSVLHQTKARTAKTETSSSSSSGGSGNTSGVAPSSSPVPNVQGNNTNSDT
ARSVTPSANKENTVDAKEAKNSSNNAKQTTDHVSAQQSHQNAQSQAQLQMQLQHELQQQA
AFFQPQFLNPAFFPQFGMTPEALLQFQQPQFLFPFYIPGAEFNLSPELALHSAAAFGMPG
LTGSFLEDLKQQMQQQHQLQQAQAQQQAQQQAQQQQQQQQQASQLQLQQQKNQQLQSHKP
KMEPNAVSVSDIQMSREAEEHLEKQESKAKMENGGDGVSEGGKDNKDKKSKFPEPLIPPP
RIVSGARGNAAKALLENFGFELVIQYNENRQKNQKKNKEGEQQQQPQKVEINNDKLECGI
CGKLFSNMLILKSHQEHIHGQFFPYGELEKFAQQYREAYDKLYPINPPSPETPPPPPPPP
PPPPAPVTTQQAASNSMSKPQIQAPSPAPQQATQPHXPPPPPPPPSAPPQVSPSSVPLDF
SLFPPLMMQSIQHQGLHPQLALQLPTMDSLSSDLTQLCQQQLGLDPNFLRQSQFKRPRTR
ITDDQLKVLRAHFDINNSPNEEQIQEMADKSGLPQKVIKHWFRNTLFKERQRSKDSPYNF
NIPPITTLEDIRLESQYSTLEYYRTDATMNKRSSRTRFTDYQLRVLQDFFDTNAYPKDDE
IEQLSTVLNLPSRVIVVWFQNARQKARKSYENQADAKDNEKKELTNERYIRTSNMQYQCK
KCSVVFPRIFDLITHQKKTCYKDEDEEGNEDNQSEEYMDMGEPGPAKHPESSKHHHVTAT
SSGSSSPLMPSPRPNLGKISPKPEPPSEPKPKEPEPAPSPVMMKSLPEPRPSKASTPQPP
PQKTPQPQMSRTHSQPQSAAVPSSPLSLALSSLTNSLPPQMLQYQCDQCKIGFPSVELWQ
EHQHMHFLAAQNQFLHSQFLERPMDMPYMIFDPNNPLMTSQLLSGGLQMPIQSGSGLSSG
PGSGSMKRKLDEKEDGSNEKDNGNMTEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRK
MLDHIAREVGLKKRVVQVWFQNTRARERKGQFRALGPSQSHKKCPFCRALFKAKSALDSH
IRSRHWHEAKQAGFSLPNSPLMNQDDGGESPHKYNFFEYPQLPTKTEPNEYELPAASSTP
VKPSEAPLKNLLSPSSLKAENCDESEGLNINSAEASSYDINNKMDFDETSSINTAISDAT
TGDEGNNEVESLTANGGDKLGCDSKSNQAQSSDGGGDDRFPFSMVSPSLSYSGKDGDSCS
YSYSYYSSRDDDMDDNNDQSETSSLTDPSSPSPFGSGNPFKSGKGSGSGGDRPGHKRFRT
QMSNLQLKVLKACFSDYRTPTMHECEMLGSEIGLPKRVIQVWFQNARAKEKKFKINIGKP
FMISQGGPDGPRPECTLCGVKYTARMSIRDHIFSKQHIAKVQETLGNQVDREKDYLTPTT
VRQLMAQQEMDRLKKAGSDGFSSLAAQQLQTAVDQNNALHGLSLPSGYPGISGLPPVLLP
GVNGPSSLPVYPPNTPALASPGAGMLGFPTPATPSPAMSLSTTPTKTLLQTPPPPPPPPP
PSVSSIPLTSTNHIEQHRKYQERDSNNSSSKKSVEKPHHQKKAKEREAENGGRPQTPNVS
NNKKREKPSPAMGKPGSEGHLDAAQLQALQNALAGATDPSSFLGGQFLPYFLPGFANSFS
PQLLGGMQAGGYFPPFGGMENLFPYGPAAIPQAAMAGMNPTALLQQYQQYQQSLQDSLQK
QQQQQQQQQQQLEQQHQHHKQQQQKQKQKPTPVKASSPCVQSNSNSFKPKESMDDTNNNK
GSLTESTKVESPTETKSTTDFPDAFIVPSVKHEFICRKCHKVFGDEGSAVHHQKSFCYFG
NPFPDPQETVLRQAVSKYTCIACNVVVNGNEALGQHLQSSLHKEKTIKQAMRNAKEHARL
LPHSVCTPTPVNTTSTSQSAAPPSNNTFPHLSRLSIKSWPNILFQATARKAASSSSSPSA
SPLPLPPLSLPLMVTSTSCSSVSGVPTSLPNKNCSDESDNELSQKLDDLDKVLEAKAKPT
SGLDAGFSSIRMDMFSV
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
attcttttctctgtgtttacttttctctcagaagagccatgtgatgacgaagcccccctt
cctccccgctcttcctccaggcctggcctcaacgacagagagctggctgacagagaacac
agagtgaactctctgtctaaagagtctcctggatccaacgctgtgggaaaacgctccatg
ctgccagagagacagaatgacagcccgcccaaaaggcccaagtctgcagaggggaagacc
agcgttagcgagcaggtgcagcagtgcccctattgtaactacagcagtaaagacgccaac
aggatacagctccacgtggtgtcccagcattccatgcagcagccagtgatcagctgccca
ctgtgccaggacgtcctgagcaacaagatccacctgcagctccacctcacacacctgcac
agcgtggctccagactgtgttgagaaactgcttatgaccgtggctgggcctgatgtgatg
gtgcccaataacatgatgcatccttcacctggacaagacaacgctctgtctctgatggat
tcttctgctgttctctctgagaagtatcgaaagcccacagggaacagttccaaggaagag
atgaatagcacaggccaaggcaagagtgaactagacctccatggagaggaactcaaaccc
cccaaggatgggtctgatgccccagactggaagaggtccgttgtggtcgggcaggatcga
aagagccctgactccctccaggaccatctgaacgacctccagagatgccagcagcaacag
caacagctctcggtctccgaccgccacgtctacaaataccgctgcaaccactgcagcctg
gccttcaagaccatgcagaagctgcagatacattcccagtaccatgccatccgggcggcc
accatgtgcagcctctgccaacgcagcttccggacattcttggcgctccggaagcacttg
gagaatggacatccggagctgagcgaagccgaggtccaacagctctgcggcagcctgccg
gtaaacggagatttcctctccgagagcgaggccagggcctatgaggaggcccagcaggcc
ttcgaacaggaaatggagaaagacgatgagctggatctggaagagaaggccagcccaaca
ggaagtgacagtagctcgttgctagatgacatgggagccgaaactaagcgaaccctcccc
ttcaggaaaggccccaacttcaccatggagaagttcctggacccgtcccggccgtacaag
tgcacggtgtgtaaggagtccttcacccagaaaaacatcctcctggtccactacaactct
gtctctcacctgcacaagctgaagaaggttctccaggaggcctccagcccggttcctgca
gagaccaacagcaatgtagacaacaaaccattcaaatgcaatatctgcaatgttgcctac
agccaaagctcaaccctggagatccacatgaggtctgtgctgcatcagaccaaagctaga
actgccaaaacagagacaagcagcagcagtagcagtggagggagtgggaacactagtggc
gtggctccatccagcagcccagtcccaaacgtacaaggcaacaacaccaactcagacact
gctagaagcgtgacgccgtcggctaacaaagaaaacactgtagatgccaaagaagccaaa
aacagcagcaacaacgcaaagcaaactactgatcatgtctctgcacagcaaagccatcag
aatgctcagtcccaagctcagctacagatgcagctccaacatgagctccagcagcaggct
gcctttttccagccccagttccttaacccggctttcttcccccagttcggcatgacccca
gaggctctgcttcagttccagcagccacagttcctgttccccttctacatccctggggca
gaattcaacctgagcccagagctggctcttcactcagccgccgctttcggaatgccagga
ttgactggttctttcctggaagacctgaagcagcagatgcagcagcaacaccagctacag
caggctcaggctcagcagcaggctcaacagcaggctcaacagcagcagcaacagcagcaa
caagcatcccagttgcagctccagcagcagaaaaaccagcaactgcagagccacaagccc
aaaatggagcccaatgctgtgtcagtgtctgacatacagatgtccagagaagcagaagag
cacctggaaaaacaggagagtaaagcaaagatggagaacggaggggatggagtcagtgag
ggaggaaaggacaacaaagacaaaaagtccaagtttcccgagccactgattcctcctcca
cgtatcgtgtcaggagccagaggaaatgcagccaaggcccttctggagaactttggattt
gagctggtcatccagtacaatgagaacaggcagaaaaaccagaagaaaaacaaagaagga
gaacaacaacaacaaccgcaaaaagtggagatcaataacgacaagctggaatgtgggata
tgtggaaagctcttctccaatatgctcattctcaaaagccaccaagagcacatccacgga
cagttcttcccttatggagagctggagaagtttgcccagcagtacagagaggcctatgac
aagctttaccccattaaccccccttccccagagactcccccacctccacctccccctcct
cctcccccaccagccccagtgaccacccagcaagctgcctccaactccatgagcaagccc
cagatccaggccccatcccctgcccctcaacaggcaacccagccccacnccccacctccc
cctcctccaccgccctctgcacccccacaggtttctccctcttccgtcccactagatttc
tcccttttcccccctctgatgatgcagtccatccagcaccaagggttacaccctcaactt
gccctacagctgcctacaatggactccctgtcctctgatctcacccagctctgtcagcag
cagttaggcctcgatccaaacttcttgaggcagtcccagttcaagcgccctcgaacccgc
atcacggacgaccagctgaaggtcctcagagcgcactttgacatcaacaactcgcccaat
gaggagcagattcaagagatggccgacaagtccggcctcccccagaaagtcatcaagcac
tggttccgtaacaccctcttcaaagagaggcaacgaagcaaagattctccttataacttc
aacattccacctattaccacattggaggatattaggctggagtcccagtatagtacactg
gagtactacaggactgatgccactatgaacaagaggtcctccaggacaaggttcactgac
taccaactgagggttctgcaggacttctttgacacaaacgcttacccgaaagacgatgag
attgagcagctctccactgtgcttaacctgccatcgagggtcatcgttgtgtggttccaa
aacgcccgccagaaggcccggaagagctacgagaaccaggcagatgctaaagacaacgag
aagaaagaactgacgaatgagcgctacatccgcaccagtaacatgcagtaccagtgcaag
aaatgcagtgtggtgttcccgcgaatctttgacctgatcacccaccagaagaagacgtgc
tataaggacgaggatgaggaagggaatgaggacaaccaatctgaagagtacatggatatg
ggagagccaggcccagccaagcacccagagtcatccaagcatcatcatgtaacagccact
agctcaggctccagctcccctctgatgccctcccctcgccccaacctggggaagatctca
cccaagcctgaacctccctctgagcccaaacctaaagagccagaacctgccccttcccca
gttatgatgaagtctctaccagagcccagaccctccaaggcctccacccctcagccaccc
cctcagaagaccccccagccccagatgtccagaacccactcccagcctcagtcagccgcc
gtcccctccagccccctctccctcgccctctcctccctcactaacagcctccctccccag
atgctccaataccagtgcgaccagtgcaagataggcttcccaagtgttgagctatggcag
gaacaccagcatatgcatttcttggctgcccagaaccagttcctccattcccagttcttg
gaaaggcccatggacatgccctatatgatcttcgaccccaataatcctctgatgactagc
cagctgctgtcgggaggactccagatgccaattcaaagcggctctggtttgtcctcaggc
cctggctctggctccatgaagagaaaactagacgagaaagaggatggatccaatgaaaaa
gataatggaaatatgactgaagaacagcacagagacaaacgtctcagaactaccatcacc
ccagaacaactagagatcctctacgacaaatacttgctggactcaaatcccacaaggaag
atgctggatcacatcgcccgtgaggttggcctgaagaagagagtggtgcaggtgtggttt
cagaacacacgtgcccgagagagaaagggacagttcagagctctgggtccctcccagtca
cacaagaaatgccctttttgccgggcgctgttcaaggccaagtcagctttggacagccat
atccgctctagacactggcatgaagccaaacaggcagggtttagtctgcccaatagccca
ctgatgaaccaagacgatggaggcgagagcccacacaagtacaacttctttgagtatcca
cagctacccaccaagactgagccgaatgagtacgagctgcccgcagcctcctcaacgcca
gtcaaaccatctgaggcaccgttaaaaaacttattgagcccttcatccttaaaagcagaa
aactgtgatgaatctgaagggcttaacattaattctgcagaggcctcatcctacgacatc
aacaacaaaatggactttgacgaaacctcgtccatcaacacggccataagtgacgccacc
accggagacgagggcaacaatgaggtggagagcctcacggccaacggaggggacaagctg
ggatgcgacagcaagagcaaccaggcccagagctcagacgggggtggcgacgaccgcttc
cccttcagcatggtgagcccctcccttagctactcgggcaaggacggggactcctgctcc
tactcctactcctactacagctccagagatgacgacatggacgacaacaacgaccagagc
gagacctccagcctgaccgatcccagctctcccagccccttcggaagtggaaatcccttc
aagtctgggaagggcagcggcagtggtggcgatagaccaggccacaagcgcttcaggact
cagatgagcaaccttcagctgaaagtcctcaaagcttgctttagcgactaccgcacacca
accatgcatgagtgtgagatgctgggcagcgagattggcctccccaagcgcgtgattcag
gtgtggttccagaatgcccgcgccaaggaaaagaagttcaaaatcaacattggaaagcca
ttcatgatcagtcaaggcgggccggatgggccccggccggagtgtactttgtgtggtgtg
aagtacactgcccggatgtccatccgcgaccacatcttctccaaacagcacattgctaaa
gtgcaggagactctgggcaaccaggtggacagagagaaggactatctaacgcccaccacg
gtccgtcagctgatggctcagcaggagatggatcgtctgaaaaaggctgggagcgacggg
ttcagcagcctggccgcccaacagcttcagactgccgtggaccagaacaatgcacttcac
ggcctcagcctgccctcaggctaccccgggatctctggacttccgccggtactacttcct
ggggtcaacgggccgtcctcacttcctgtttacccacccaacacacctgctttagcgtct
cctggtgctggtatgcttgggttccccaccccagccaccccctctcctgccatgtctctc
agcactaccccaaccaagactcttctgcagactcctccacctcctcctcctcctccacct
ccttctgtttcctccatccctctgacttcaaccaaccacattgagcagcacagaaaatac
caagagagagacagcaacaacagcagcagcaagaaatcagtggagaaaccgcaccaccag
aagaaggcaaaggaaagagaagcggagaatggcggccgtccacagacccccaacgtcagc
aacaacaagaagagggaaaagccgtctccagccatgggcaagccaggaagtgaaggccat
ctggatgccgctcaactacaggctcttcagaacgctctggccggcgccacagacccaagc
tccttcctgggaggccagttcctgccttacttcctcccgggcttcgccaacagcttttcg
ccccagctccttggaggaatgcaggcggggggatacttccctccgttcggcggaatggag
aacctattcccatacggacctgctgccatcccgcaggccgccatggcggggatgaatccc
actgccctcctgcagcagtatcagcagtaccagcagtctctccaggactccctgcagaag
cagcaacagcagcagcagcagcagcagcagcagcttgagcaacaacatcagcatcataaa
cagcagcagcagaagcagaagcagaagccaacccctgtgaaggcatcttcaccatgtgtg
cagagcaactccaactccttcaaaccaaaagaatctatggatgacaccaacaacaacaaa
ggctctttgacagaaagcacaaaagtagaatcgccaacagaaaccaaaagtaccacagac
tttcctgacgctttcattgttccatctgtcaagcacgagttcatatgcaggaagtgccat
aaggtattcggcgatgagggctccgcagtgcatcaccagaagtcattctgctacttcgga
aacccctttccagacccgcaggagacagttcttagacaggcagtgagcaagtacacgtgc
atcgcctgtaatgtggtggtcaacgggaatgaagcacttggccaacacctccagtcgagc
ttgcacaaagagaaaacaatcaaacaagcaatgagaaatgccaaagagcatgctagatta
ttacctcactctgtctgcacacctactcctgtcaacaccacatctacctcgcagtctgca
gctcctccttctaataacacctttccccatctgtctcgcttatccatcaagtcctggcca
aatatccttttccaggccaccgcccggaaagctgcttcttcctcctcctccccgtctgct
tctcctcttcctcttcctcccctttccttgcctctaatggttacctcaacgtcctgcagc
agcgtctcaggggttcccacctccctacccaacaagaattgttcagatgagtctgacaac
gagctaagccagaagctggatgacttagataaggtgttggaggccaaggctaagccaacc
tccggcttagacgcaggcttcagcagtatcagaatggatatgttcagtgtgtag
DBGET
integrated database retrieval system
