Salmo salar (Atlantic salmon): 106578557
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Entry
106578557 CDS
T04363
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106578557
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
106578557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
Zn_SUZ12
zf-C2H2_6
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
106578557
NCBI-ProteinID:
XP_014013010
UniProt:
A0A1S3NCM6
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All DBs
Position
ssa19:complement(19438873..19502116)
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AA seq
1207 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTIYSNVVKTPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHIGDRSDEAREECGSDREDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTVHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPLQE
QLPLNQIKSEPVDYEYKAMVLSPATTGGNGHGGGVLNGVPSAPLQGAVQAVMLPTMGLVS
PISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDG
NATKIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPQAQPPTEAAIEPCSKAQQRLPED
LTLSRPPRNKEEKMEEKNEKEEGEETTKTCLLCDDCPGGLDVLHALEHCKKASGIRINGD
KSESAIASLLSEGVGNQPKNLLSLLKAYFALNAEPTKEELSKISDSVSLPTDVVKKWFDK
MQSSQVSLGAPTPPSEEEGPLSESPGATVVSPKVRPEQDTEGPTMMQSGPAEATPAEVNG
SMRSPASPTPLNLTAGGPVPAKPSSSDSIDGPLDLSLPKPTRDEAAATATYHAAVYSHQD
EPLNLTKTCTTKIELPLASASGHHVTSQPVSLYTASPQSANPISIMTTQLPSGTIYAITD
QGRAGMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQD
TSSEGVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQE
GSQGGIGEEVLEEEMESPVGLALGLGGEQQELSDSRPTSSHLDSDERGSSTREDEEESEE
EGEEEDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEEEEEAEGEKEDDTGREEGE
NEEEQGVERVVVGGEGEEGEEEEGVVGVEVKEEQEEEEVTGKKADTRQEEVQENREKEEE
HGGEKEQAEEQVEEKLSEKEETMDKEESGSRAAEESEVMKENEGETNRNTVSEDKNQTPT
GEKGDPN
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accatctacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctg
cacatcgtggaggaagacggaagtctggcagacggggcagactgtgacagtaatgtgccc
agtgaagatcacatcggagaccgctcagatgaagcgagggaggagtgtggttcagacagg
gaggacgatggcaggacggatgctctggtggaagagatgctgcagcagggagacacggcc
gtcatttacccagaagccccggaggacgagccacgccaagggacccccgaggccagcgga
catgacgagaacggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgttacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggtccacaaagctggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccgtacgagtgctccaactgtaagaagcgt
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcagcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagcc
atgcctgcctcgccctcctccaccacacgcacacagatctgggataaacctttacaggag
caactacccctcaatcagatcaagagcgagccagtggactatgagtacaaggccatggtg
ttgtctccagcaacgacgggaggaaacggtcatggaggaggggtgttaaacggggttccc
tcagcccccctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtatct
cccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggatggtaac
atgatcagacagatgttggagaacaatgccaaggcagcggggaccggcacaggggcgacg
ggtgttcctcaccagcagctcatctcagccatcagtctgcccatcatcggtcaggacggc
aacgccaccaagatcatcatcaactacagcctcgatcccagccagacccagctcactgcc
cagaacctgaagaaggaacctcagaccctggctacaatgccaggccagccccaggctcag
cccccgaccgaggctgccatagagccctgcagcaaggcccagcagagactcccagaggac
ctgacactcagcaggccccccaggaacaaagaggagaagatggaagagaaaaacgagaag
gaggagggggaggagaccactaagacctgtctgctctgtgacgactgccccggcggtctg
gacgtgctccacgcactcgagcactgtaagaaagcctcaggcatcaggatcaatggtgac
aaatcagagtcggccatcgcctcgttactgtccgagggggtcgggaaccagcccaagaac
cttctgtccctcctcaaggcctacttcgccttaaacgctgagccaaccaaggaggagctc
agcaagatctcagattcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaag
atgcagagcagtcaggtctcactaggagctccgacacctccgtctgaggaagagggaccc
ttgtctgagagtcctggggccacagttgtgtcccctaaggtaagaccagagcaggacaca
gagggtcccaccatgatgcaatccggcccagccgaggccactccggctgaggttaacggc
tccatgcgctccccggcctcccccacaccactaaacctgaccgccggggggcccgtccca
gccaaaccctcctcctcggacagcattgatggccctctggacctgtcattaccaaagccc
acccgagacgaggccgcagccaccgccacttaccacgccgctgtttactcccatcaggac
gaacccctgaacttgacgaagacttgcacaacaaagatagaacttccgctcgccagcgcc
tctggccaccacgtgactagtcaacctgtgtccctgtacaccgctagcccacaaagtgcc
aaccccatcagtatcatgaccactcagctgcccagcgggaccatttatgccatcactgac
cagggccgtgcgggcatgccctgcctccgggcagttaccaccagtaacaaccagactatc
ctcatcccacagctggcctatacctataccactacagctacagccaacagccctgcaggg
acagagacacaggagaagaccacactgcaggtcaatggcatcaaggaggagcgtcaggac
accagctcagagggtgtgtccaccatggaagagctgaacgactcagactccgccccttcc
aggaagaaaatgaggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagctctctgctccgacataaatacgaacacacaggcaagcgaccccac
gagtgcggtatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactctggagagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactcg
ggctcctactcccagcacatgaaccaccgttactcctattgcaagaaagaggcgcaggaa
ggaagtcagggaggtataggggaggaggtgctggaggaggagatggagagccctgtgggg
ttggccctgggcctcggaggggagcagcaggagctgtcagacagcaggcccacctcctcc
cacctggactctgacgagcgagggagcagcaccagggaggacgaggaggagagcgaggag
gagggagaggaggaggacatggagacagcggcaggggaggaggtggagggggatccggac
agagttctggatatggatgatatacaggtggtgcggataggagacgagggaggggacgag
gaggaagaggaagaggcggagggggagaaggaagatgacactggtcgagaggagggagag
aatgaggaagagcagggagtggagagagtagtggtggggggtgaaggggaggaaggagaa
gaagaggagggggtagtgggggttgaagtaaaggaagagcaggaggaagaggaggttaca
gggaaaaaggcagacacaaggcaagaggaggtacaggagaacagggagaaagaggaggaa
catggaggtgagaaggaacaggctgaggagcaggtggaggagaagctgtctgagaaggag
gagacaatggacaaggaagagtcagggtcgagggcggcggaggaaagtgaggtcatgaaa
gagaatgaaggtgaaacaaacaggaacactgtttcagaagacaagaaccagacaccgaca
ggagagaaaggagatccgaattaa
DBGET
integrated database retrieval system
