KEGG   Salmo salar (Atlantic salmon): 106578590
Entry
106578590         CDS       T04363                                 
Name
(RefSeq) cadherin-20-like
  KO
K06807  cadherin 20, type 2
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sasa04515]
    106578590
Cell adhesion molecules [BR:sasa04515]
 Cadherins
  Major cadherins
   106578590
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th Fibulin_C Cadherin_4
Other DBs
NCBI-GeneID: 106578590
NCBI-ProteinID: XP_014013054
UniProt: A0A1S3NC75
LinkDB
Position
ssa19:24087460..24304795
AA seq 806 aa
MGDRHHHHPGGGRPVYTLLLSIGLALLALLSEAQGCMDRAKTEEESGAGLLRRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLRAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFLEGPYQATIPEMSSIGTE
VIRMTATDADDPTYGNSARVVYSILQGQPYFSVEAKTGVVRVSLAGMDREVRENYSVIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVPESAPVSSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDINTDPTNLFGIITIKKPLNFETKASYTLKIEGANTHLDHR
FPDKGPFSHVTIVHVSVEDVDEPPEFSSAAYYIEVPEDTEISTVFMTVSARDPDAANTSI
RYSIERNTDLGKYFYIDITSGALMTVLPLDREEFSWHNITVLAMEMNNPRMIGSVSVAVK
ILDVNDNPPLLTQYFEAFVCESANAGQLIQTVTAVDTDDPLGGHHFYYSLALEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGEQPVQTSTSTLTIRVCSCDFEGNI
MSCNAEAYHLPASLSRGALIAILACIFVLLVMVLLMLSLQSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPREAHLVGKQRQDMLPEIESLSRYVPLASVGGPGSGCG
GGDSNVQGYVLAKLLETDLNPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETNNPSMW
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgggagatcgacatcaccaccatcctgggggtggtaggcctgtctacaccctcctactc
agcataggtctggccttgctggccctgttgtctgaggcccagggctgtatggatagagcc
aagacagaagaggagagtggagcaggactgttgaggagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctgtacataggaaagctc
cactcagacatggacctaggggacggttccatcaagtacatcctgtcaggcgacggtgcg
ggcaccaccttcaccattgacgacagtacaggcgacatccatgctatcaaaaggctggac
cgtgaggtgaaggcccagtaccttctgcgagcccaggcctggaacagacagacagaccga
cccctggagcctgagtctgagtttatcgtcaaaatccaggatatcaatgataatgaacct
aagttcttggaagggccctaccaggccaccatacctgagatgtcatccatcggcactgag
gtgattcggatgacagccacagatgcagatgaccctacgtatggtaacagtgccagggtg
gtctacagcatcctacagggacagccatacttctctgtagaggccaagactggcgtggtg
cgtgtgtctctggcgggcatggaccgcgaggtcagggagaactactccgtcatcatccag
gccaaggacatgggaggccagctagggggtctggccggaaccacagtggtcaacatcacc
ctcagtgacgtcaatgataacccacccatgtttgatcagaagctgtaccagatgagtgtt
ccagagtcggctccggtgtcgtctgttgtgggtcgtattcgggcgaaggaccgtgacatt
ggcatcaatgcagagatgaggtacagcataatcgacggagacgggagggacaccttcgac
atcaacacagacccaaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagaccaaggcgagctacactctgaagatagaaggagccaacacacaccttgaccaccgt
tttccagataagggcccgttcagccatgtcaccatcgttcacgtcagcgtagaagatgtg
gacgagcccccagagtttagctcggctgcctactacatagaggtccctgaggacacagag
atcagcacagtgtttatgacggtctccgctagagaccccgatgctgccaacacctccatc
aggtattccatagagaggaacactgacctggggaaatacttctatattgacatcacttcc
ggggcgttgatgacagtgcttcctttggacagagaggagttctcctggcataacatcacc
gtcctggccatggagatgaataaccccaggatgatcgggagtgtgtctgtagccgtgaag
attctggacgtgaatgataaccctccgttgctgacacagtactttgaagcctttgtctgt
gagagtgccaatgctggacagctgattcagacagtgacggcagtagacacagatgatccg
ctgggaggtcatcacttctactacagcctggccctagaggcagctaacaaccccaacttc
acccttagagacaaccaagacaacacagcatggatcctgacgcgtcgcgggggctggtct
cagcaggatcagtcagtctactaccttcctatcttcatctcagatggagagcagccagtc
cagaccagcaccagcaccctgaccatccgtgtgtgtagctgcgattttgagggcaacatt
atgtcctgtaatgctgaggcctaccacctcccagctagtctgagcagaggggcgctcatc
gccatactggcatgtatcttcgtcctgctcgtgatggtcctgctcatgttgtccctccag
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccatgagaacattgtc
cgctacgatgacgaggggggcggagaagaggacaccgaggccttcgacatcgctgccatg
tggaacccccgtgaggcccacctagtggggaagcaacgtcaggacatgctgcctgagatt
gagagcctgtcgcgttacgttcccttagcatcagtaggcgggccgggtagtggttgtggt
ggtggagacagcaacgtccaggggtatgtgctggccaagctcctggagacggatctgaac
ccctgcgccccgccttacgactccctgcagacgtacgcctacgagggtgagggatcagtg
gccgagtccctgagctcgctgcagtctgggtgctccaatactgatcatgagtatgactat
ctcaatgactgggggcccagatttaagaaactggcagagatgtacggggttctagagacg
aacaacccttccatgtggtag

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