Salmo salar (Atlantic salmon): 106578590
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Entry
106578590 CDS
T04363
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106578590
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106578590
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
106578590
NCBI-ProteinID:
XP_014013054
UniProt:
A0A1S3NC75
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Position
ssa19:24087460..24304795
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AA seq
806 aa
AA seq
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MGDRHHHHPGGGRPVYTLLLSIGLALLALLSEAQGCMDRAKTEEESGAGLLRRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLRAQAWNRQTDRPLEPESEFIVKIQDINDNEPKFLEGPYQATIPEMSSIGTE
VIRMTATDADDPTYGNSARVVYSILQGQPYFSVEAKTGVVRVSLAGMDREVRENYSVIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVPESAPVSSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDINTDPTNLFGIITIKKPLNFETKASYTLKIEGANTHLDHR
FPDKGPFSHVTIVHVSVEDVDEPPEFSSAAYYIEVPEDTEISTVFMTVSARDPDAANTSI
RYSIERNTDLGKYFYIDITSGALMTVLPLDREEFSWHNITVLAMEMNNPRMIGSVSVAVK
ILDVNDNPPLLTQYFEAFVCESANAGQLIQTVTAVDTDDPLGGHHFYYSLALEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGEQPVQTSTSTLTIRVCSCDFEGNI
MSCNAEAYHLPASLSRGALIAILACIFVLLVMVLLMLSLQSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPREAHLVGKQRQDMLPEIESLSRYVPLASVGGPGSGCG
GGDSNVQGYVLAKLLETDLNPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETNNPSMW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgacatcaccaccatcctgggggtggtaggcctgtctacaccctcctactc
agcataggtctggccttgctggccctgttgtctgaggcccagggctgtatggatagagcc
aagacagaagaggagagtggagcaggactgttgaggagggtgaagagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctgtacataggaaagctc
cactcagacatggacctaggggacggttccatcaagtacatcctgtcaggcgacggtgcg
ggcaccaccttcaccattgacgacagtacaggcgacatccatgctatcaaaaggctggac
cgtgaggtgaaggcccagtaccttctgcgagcccaggcctggaacagacagacagaccga
cccctggagcctgagtctgagtttatcgtcaaaatccaggatatcaatgataatgaacct
aagttcttggaagggccctaccaggccaccatacctgagatgtcatccatcggcactgag
gtgattcggatgacagccacagatgcagatgaccctacgtatggtaacagtgccagggtg
gtctacagcatcctacagggacagccatacttctctgtagaggccaagactggcgtggtg
cgtgtgtctctggcgggcatggaccgcgaggtcagggagaactactccgtcatcatccag
gccaaggacatgggaggccagctagggggtctggccggaaccacagtggtcaacatcacc
ctcagtgacgtcaatgataacccacccatgtttgatcagaagctgtaccagatgagtgtt
ccagagtcggctccggtgtcgtctgttgtgggtcgtattcgggcgaaggaccgtgacatt
ggcatcaatgcagagatgaggtacagcataatcgacggagacgggagggacaccttcgac
atcaacacagacccaaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagaccaaggcgagctacactctgaagatagaaggagccaacacacaccttgaccaccgt
tttccagataagggcccgttcagccatgtcaccatcgttcacgtcagcgtagaagatgtg
gacgagcccccagagtttagctcggctgcctactacatagaggtccctgaggacacagag
atcagcacagtgtttatgacggtctccgctagagaccccgatgctgccaacacctccatc
aggtattccatagagaggaacactgacctggggaaatacttctatattgacatcacttcc
ggggcgttgatgacagtgcttcctttggacagagaggagttctcctggcataacatcacc
gtcctggccatggagatgaataaccccaggatgatcgggagtgtgtctgtagccgtgaag
attctggacgtgaatgataaccctccgttgctgacacagtactttgaagcctttgtctgt
gagagtgccaatgctggacagctgattcagacagtgacggcagtagacacagatgatccg
ctgggaggtcatcacttctactacagcctggccctagaggcagctaacaaccccaacttc
acccttagagacaaccaagacaacacagcatggatcctgacgcgtcgcgggggctggtct
cagcaggatcagtcagtctactaccttcctatcttcatctcagatggagagcagccagtc
cagaccagcaccagcaccctgaccatccgtgtgtgtagctgcgattttgagggcaacatt
atgtcctgtaatgctgaggcctaccacctcccagctagtctgagcagaggggcgctcatc
gccatactggcatgtatcttcgtcctgctcgtgatggtcctgctcatgttgtccctccag
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccatgagaacattgtc
cgctacgatgacgaggggggcggagaagaggacaccgaggccttcgacatcgctgccatg
tggaacccccgtgaggcccacctagtggggaagcaacgtcaggacatgctgcctgagatt
gagagcctgtcgcgttacgttcccttagcatcagtaggcgggccgggtagtggttgtggt
ggtggagacagcaacgtccaggggtatgtgctggccaagctcctggagacggatctgaac
ccctgcgccccgccttacgactccctgcagacgtacgcctacgagggtgagggatcagtg
gccgagtccctgagctcgctgcagtctgggtgctccaatactgatcatgagtatgactat
ctcaatgactgggggcccagatttaagaaactggcagagatgtacggggttctagagacg
aacaacccttccatgtggtag
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