Salmo salar (Atlantic salmon): 106578646
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Entry
106578646 CDS
T04363
Name
(RefSeq) rab effector MyRIP-like
KO
K22237
Rab effector MyRIP
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106578646
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106578646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
FXR_C1
DUF155
Motif
Other DBs
NCBI-GeneID:
106578646
NCBI-ProteinID:
XP_014013156
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All DBs
Position
ssa19:28072957..28249298
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AA seq
1046 aa
AA seq
DB search
MGRKLDLSGLTDDEAEHVLKVVQRDMKLRKKEEDRLSEMKQELAEEGSRCSILSKQHRFN
EHCCIRCCSPFTFLVNPKRPCLDCQYNICKTCRTYSKREKAWLCTVCQKTRILRTQSLEW
YYNNVKSRFKRFGSAKVLKTLYRNHVVERGGILDLPESSVHDGSNDNDGSVCGSDSTFYR
QSEGHSMAETLTVALRVAEEAIEEAIANAEEFSDSLEKQNEARYLRDHKEELIEELATTI
VQKIIQRRKHSEMQTEYDFVWPQRQSQGQPQGSELSSPSQHPHSTMAQANQAHLKSSYSL
WRSRSAFSLTSDDSPEKVTEALMGAGGGVQDYASLKKETARASSLPSWKSVDRLDNSSAS
SVLQSPDGNWIALQSSQYSRPSLLAKRKSLVFSVLEKESGVVSAYDEMGSDSDQENDEGG
WGSALRQFRRKLSDETYYTDSQHDPEWTYTPVHLPVTSPSSGQYTNTETINSDSESSSVP
SARPRKPLHNVMKKKGPNSDPHLHPQQAQYHHHHHHQHQNFPSYPLHPEALDVNFNPKVT
GDSSEAEDSMQSDQVRRSRRRRKNKREVAGNQAHTQTHTQPLYAQSVQENSFLLNGLLKR
GMSEEMAAPDVVPIPKASSEAMTPEDQDTVGPNSAARNPMTPDPLSTSSTGPGSGDTLEQ
KFSSKLSQLVGRANSKEVVSSSEDEPIKSPGGRDRESDRPKEKLRQNAREGDRQRQSERP
RDRPSSKSQDGAKRETIESVKGPELENRERLTERPTLREEERVKERRLGRGGKSLEEKVD
DREEKRVEKNRQSKRPQRKEVDRKTEKKGEQVEDQNEKSGSTPISLVITPSVQEGVLCDG
QEGQNWLELQQRLQLLSSLLQQKYSAASLCSITTEVLKVLNATEELIGEAGGDSVTPSEC
MSASESFSSSLETRELDQKLTKMEENVYLAAGAVYGLEGALGDLEEVARDISSDTSDREL
AFLEDQVATAATQVQQSELQISDIEVRILSLKTAGLNVTACNRFSKFPKPKPKPQTLNTS
RQQRRKLPAPPAKDKESEQQVRALQP
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagctggacctgtcgggcctgacggacgatgaggcagagcacgtgctgaag
gtggtgcagagggacatgaagctgaggaagaaggaggaggacaggctcagtgagatgaag
caggagctggcggaggaaggcagtagatgctccatcctctccaagcagcaccgcttcaat
gagcactgctgtatccgctgctgctctcccttcaccttcctggtcaaccccaagcgcccg
tgtctggactgccagtacaacatctgcaagacctgccgcacctacagcaagcgggagaaa
gcctggctctgtaccgtctgccagaagaccaggatattgaggacccagtctctagaatgg
tactataacaacgtgaagagccgcttcaagaggttcggcagtgccaaggttctgaagacg
ctctacaggaatcacgtagtggagagaggaggcatcttggatctaccagaaagcagtgtg
cacgacggaagcaatgacaacgatggcagcgtctgtggcagtgactcaaccttctacagg
cagagtgaaggacacagcatggcagagaccctcacggttgccctgcgcgttgctgaggag
gccatagaggaagccatcgccaacgcagaggaatttagtgacagcttggagaagcagaat
gaggctcggtacctacgggaccacaaagaagagcttatagaggaactggccacaaccatc
gtacaaaaaatcatccagaggaggaagcattccgagatgcagacagagtatgactttgtg
tggccccagagacagagccagggccagcctcagggcagtgagctgtcctcccccagccag
caccctcacagcaccatggcccaggccaaccaggcccacctcaagagctcctactccctc
tggaggtcgcggtcggcattctccctgaccagtgatgactccccagagaaggtcactgag
gcactaatgggggcagggggcggggtacaggactacgcctctctgaagaaggagacggcc
agggcctcctcactgcccagctggaagagtgtggaccgcctggacaactccagtgcgtct
tcggtgttgcagagccctgacgggaactggattgcgctgcagagctctcagtactcccgt
cccagcctgctggccaagagaaagtcgttggtgttcagcgtcctggagaaagagtctggc
gtggtctcggcctatgacgagatgggctctgattccgatcaggagaacgacgaggggggc
tgggggtccgcgctccgccagttccggcggaaactctcagacgagacgtactacacggac
tcccaacacgacccggagtggacgtacacccctgtccacctcccggtcacctcgccctcc
tcgggccagtacaccaacactgagaccatcaactctgactcagagtcctcgtcggtaccc
tccgcccgcccccgcaaacccctccataacgtgatgaaaaaaaaaggtcctaactcggac
ccgcatcttcatccccagcaggctcagtaccaccaccatcatcatcatcaacaccagaac
ttcccctcgtacccgctccacccggaggcgctggatgtgaactttaaccccaaggtgact
ggggatagtagcgaggcagaggacagcatgcagagcgaccaggtcaggaggtctcggaga
cgcaggaagaacaagagggaagtggcggggaaccaggcccacacacagacacacacacag
cccctctacgcacaatctgtacaggagaacagtttcctgctgaacggcctgttgaagagg
ggcatgagtgaggagatggccgcccctgatgtggtgcccatccccaaagcctcctctgag
gccatgacccccgaggaccaggacactgtgggccctaactctgcggcccgtaaccccatg
acccctgaccccctgtccaccagcagcactgggcccggctctggagacacactggagcag
aagttcagctccaaactgagccagctggttggacgagccaacagcaaagaagtagtgagc
tcatccgaggacgagccaatcaaaagtcctggagggagagaccgagaaagtgacagaccg
aaagagaagctgaggcagaatgcgagagaaggagatcggcagagacagagtgagagaccg
agagacagaccgagcagtaaaagtcaggatggggcgaagagagagacaatcgagtcagtg
aaagggccggaactggaaaatagggagagactaacggaaaggccgacattaagagaggag
gagagagtgaaggagaggaggttggggagaggaggaaagagtttggaagagaaagtagat
gacagagaagagaagagagtggagaagaacaggcaaagtaagagaccacaaagaaaagag
gtggacagaaagaccgagaaaaagggggaacaagtggaagaccaaaatgaaaagtccgga
tccacgcccatctcgcttgttattaccccatctgtccaggagggggtgctgtgtgacggc
caggaggggcagaattggctggaactacagcagaggctacagttgctctcctctctctta
cagcagaagtactcggccgcatctctgtgcagtatcaccacagaggtcctgaaggtgctc
aacgctaccgaggagctgattggtgaggcggggggcgatagcgtcactccctcagagtgc
atgagtgcgtctgaatccttctccagcagcttagagaccagggagctggaccagaaactc
acaaagatggaggaaaacgtgtacctggctgcgggggcggtgtacggcctggagggggca
ctgggggacctggaggaggtggcccgggacatcagcagtgacacctcagacagagagctg
gccttcctggaggaccaggtggccactgccgccacccaggtgcagcagtctgagcttcag
atatcagacatcgaggtgaggatattatctttaaaaacagctggactgaacgtcaccgcc
tgcaatcgtttctccaagttccccaagccaaaacctaagcctcaaaccctcaatacgtca
cgtcaacagaggagaaagctacctgcccctccagccaaagataaggagtctgagcagcag
gtgagagcacttcagccgtag
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integrated database retrieval system
