Salmo salar (Atlantic salmon): 106578665
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Entry
106578665 CDS
T04363
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106578665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_9
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
106578665
NCBI-ProteinID:
XP_014013191
UniProt:
A0A1S3NDJ4
LinkDB
All DBs
Position
ssa19:31388843..31518716
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AA seq
2079 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKALPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLTHNLLVVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGGCASLNVLSLRDNRVAKLPAELAGATEL
HVLDVAGNRLQNLPFALANLNLKAMWLTENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYTSCLDGEPESPGIEEKRLSNLSNQSHDSAASNSTASANSHEERRC
MITTARESLVGGRGEEDEELDEMEVEYVEPTVHFAEEPIYRGGNEDGEDEEGGDRVPCSD
LEEQRPQFPSEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPTSHHP
DPEEEEEEEYMVTPQRHNRIEEPEQDDRSLLHVNSSLQPVKGVSFDQVNNLLIEPARIEE
EEHTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGDKLLEVN
GVVLQGAEHHTAVEALRSSGAAVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRASGL
PFCIEAGSPAGLRHRLSTCLIRNDMGLGFSIAGGKGSTAYRTGDMGIYISRIAEGGAAHR
DCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIVLLVERDQAEPGTAGGSPGLSRA
RAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLGDEYPIEEVALVKAGGPLGLSIVG
GSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVRALLS
NKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKVS
SSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVVLVCDGFDPGNAAAI
EASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEMEKV
ERMRLEREEDTRLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRLSPSVSATAPMEAP
MQAQCSFTLEPLGFDLGQPPTSLFHVDPHALPQSCPIMNTEAGPLYMSQHSPSPLITASN
QEAARQEALPTGEDEEVVLVDSQPINFTENPFLVANRKGKGCLPSERILSGPPVGYGSAG
KLQPWLFSKAPSTEHPRTDSPIRDAPYSPSTQPPSAHSSTRSLCAGRETRFASIHFTPTA
LPAKENISPLSPYETRPGAIQPLSRGGGRPITSPATPDGHSSPNPFQHGPAPINSQTFLQ
SRAPSPDTIDEFPLNPKQAYKAFAAVPHSLAVLETPPQDLFGQRNNVHPNQPSPSPEPEL
NNEVFEDEVEGDGGMGMGQAAPVSPRPSLSSDCRDYMSLAAVPRLSRASMDMVVKTPSPG
GRDNLEQRSFRDRQKYFEIDMKQQTPDTKPKGRVSLVGADDLKKMREEEERRFEQRAREY
LMDEDDEEEDDLVKQMGVLKATGKVLLDGVEYKVEPVAMPPSYSTTPPSYCGSSGPSSVD
GNGDYQRNSLEESFRLEQQRPHSMTGLILVYPGESGAPIRTAKAERRQQERLRMQSPELA
PAGDKDLSPSEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYQSRVRASQGTAPP
PQSQNAAASSAASQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPAPTPSPTP
LEDFSPQGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDVVDDVQLIDDGSSNPVH
VADPGTEVPTATSALEMALYSNTRKLRQGCRSLETAVPT
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtcccagacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ctgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagcttgacatttccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaacgacgtctcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaaggccctgcccacgtcactctctttcctggtgaaactggaacatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactagtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctcacacacaacctcctggtggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacctgaatgtcgac
cgcaaccggctgggcgacgtgcctgatgagctgggtggttgtgccagcctcaacgtgctc
tccctcagagacaaccgcgtggccaaattgcccgctgagctggctggcgccaccgagctc
catgttctggacgtggcagggaacaggttacagaacctaccgtttgccctggccaacctc
aacctgaaggccatgtggctgacggagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgcttccccagcagccc
tcccccagcctggagaacctgctgcaaaacagtgtggatgacagctggatagacagcaac
ctgaaccgggtgtcagtaatccagttccaggaagagactaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcctacacatcctgtcttgat
ggagagccagagtctcctggtattgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcgtccaacagcacagcctctgccaactctcacgaggagagacggtgc
atgattaccacagcgagggagagcctagtgggtgggcgtggtgaggaggacgaggagcta
gacgagatggaggtggagtatgtagagcccacggtgcactttgcagaggagcccatatac
cggggtgggaatgaggacggtgaggatgaggagggtggggacagggtcccatgcagcgac
ctagaggaacagaggccccagttcccttcggagaagcagcgtctgatcaggaaggacacg
ccgcactacaagaagcacttcaagattaccaagctgcccaaacccgaggcggtggccgca
ttactgcagggcttcagccccgacgcacacctggcccaacaccccacctcgcaccaccct
gaccccgaggaggaggaagaggaggagtatatggttactccacagcgccacaacagaata
gaagagccagagcaggatgataggagtctgcttcatgtcaactcttccctgcagccggtc
aagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcgaattgaggag
gaagagcacaccctgaccattctacggcaaactgggggcctgggcatcagcatagccgga
ggacagggatccacaccctacaagggggatgatgagggaattttcatctccagggtgtct
gaagagggccctgcagcgcaggctggggtcaaagtgggagacaaactcctagaggtgaac
ggtgtggttctccagggggcagagcaccacacggcagtagaggccttgcgcagctcgggc
gccgccgtctccatgagcgtcctccgggagcacatggtggagccggagaacgccatcacc
accacaccgctgaggcccgaggatgactacttcccccgggaaagacgggccagtggcctt
cccttctgcattgaggcaggctcccccgcaggtctccgacacaggctgtctacctgcctg
atccgcaacgacatgggtctgggcttcagcattgccgggggcaaaggctccacagcctac
cgcacaggggacatggggatctacatctcgcggatcgcagagggaggggcggcccacaga
gactgcacactccgagtaggggacagggtcatcaccatcaatggtgtagacatgacagag
gccaggcatgaccaggcagtagcgctgcttaccggcacctctcccaccattgttctcctg
gtggagcgtgaccaggccgagccgggcaccgcagggggctccccgggcctgtcccgtgcc
cgcgcccactcccccccacctccagagccctctgactcacccgaccaggaagagggcaat
gatgactcgagcctcttgccccacgggaaccacctgagccagccgctgggggacgaatac
cccatcgaggaagtggcgttggtgaaagcgggcggccccctgggactgagcatcgtggga
ggcagtgatcacgccagtcacccgttcggcatcaacgagcctggtgtcttcatctctaag
gtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacaggatactggag
gtgaacaccatcgacctgcgccacgccacccaccaggaggctgttagagccctgctctcc
aacaagcaggagatccgcatgctggtgcgcagggacccctcgcctcccgggatggaggag
atagtgatccagaagcagcctggagaaaagctgggcatcagcatccgcggcggtgccaag
ggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatccaaggtgagc
tccagcggtgcggcggccagggatggccgtctgcttgtgggcatgcggatcttggaggtg
agtaaccacagcctgctgggcatgacccacacggaggctgtacgcgtgctccgcgccgtg
ggagacaccctggtcgtgctggtgtgtgacggcttcgaccctggcaacgctgccgctata
gaggcgtcaccgggcatcattgccaacccgtttgcagcaggcatcgtgcgtaagaacagc
atggagagcatctcctctatagaccgagacctgagtcccgaggagatggacatcctacag
aaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatggagaaggtg
gagcgcatgcgcttggagcgtgaggaggatactcgcctgctagaagaggagaccgagaac
ctgggcactgggcctctgaaactggactaccggacgctggccgcactgcccaccaccgct
ctgcagaaggtcaacaggttatctccttctgtcagtgcaactgcccccatggaggccccc
atgcaggcccaatgttctttcaccttagagcccctgggttttgacctggggcagcccccc
acctccctcttccatgtggacccccatgctttacctcagtcctgccccattatgaacaca
gaggcagggcccctctacatgtcccagcactctcccagtcccttgataaccgcctccaat
caagaagcagctagacaagaagccctgcctaccggtgaagacgaggaggtggttctggtg
gactcccagccaatcaacttcaccgagaaccccttcctagtggccaatcgcaagggcaag
gggtgcctcccctctgagcgcatcctatcagggcctcccgtgggctacgggagcgcgggc
aaactgcagccctggttattcagcaaggcgccctccactgagcaccccaggacagacagt
cccattagagacgccccctactcaccgagcacacaaccgcccagtgctcattcctccacc
aggtccctgtgtgcaggcagggagacccgcttcgcaagcattcatttcacccctacggca
ctgcctgccaaggagaatatctcaccactgagtccctatgagacaaggccaggtgccatc
cagcccctctcccgtggtggcgggcggccgatcacctcgccagccactccggatgggcac
agcagtcccaatcccttccagcatggccccgcccccatcaactctcagacctttctgcag
tctcgtgccccctcccccgacacgatcgatgagttccccctgaaccccaagcaggcatac
aaggcattcgccgccgtgcctcactcgctggccgtgctggaaactcccccgcaggatctg
tttggccagaggaacaatgtccaccccaatcagccttccccttctccagagcctgagctg
aacaacgaggtgtttgaggatgaggtagagggggacgggggaatgggtatgggtcaggca
gcccccgtctctccccgaccctccctctcctctgactgtcgggactatatgagtctggca
gcagtgccacgcctctccagagcctccatggacatggttgtaaagactccatcacctggg
ggcagagacaacctggagcagcgctccttcagggacagacagaagtactttgaaatcgac
atgaagcagcagacacccgacaccaagcccaaaggccgtgtgtccctggttggagcagac
gacctgaagaagatgagggaggaggaagagaggagattcgagcagcgggctcgggagtac
ctgatggatgaagatgacgaggaggaggatgacctggtgaagcagatgggagtgttgaag
gccacgggcaaagtgctgctggacggggtggagtacaaggtggagcctgtagccatgccc
cccagctacagcaccacaccccctagctactgtggcagctcagggccctcgtcagtggat
ggtaatggagactaccagaggaattccttagaggagagcttcaggctggagcagcagagg
ccccactccatgactggtctgatcctagtgtaccctggagaatcgggggctcccatccgg
acggccaaggcagaacggaggcaacaggagcggctgaggatgcagagtccagagctggcc
ccagctggagacaaggacctctccccctccgagaaacgggctctggaagccgagaagaga
gccatgtggagggcagcaaggccctatggcttagaggaggatgttaggcagtatgagcag
gacctggctaagaggctctaccagtcacgagtgagggcgtctcagggcaccgcgccaccc
cctcagtcccaaaacgccgccgcctcttccgctgcctcccagctcaggatgaagtctctg
gagcaggatgctttgaaggctcagatggtcatcgctaagtcccgggagggaaagaagcgt
ggcacactggaccagctggccgagtcgccctcacccgcccccacgccatcccccacccct
ctggaagatttcagtccacaaggagtgacgtcaccaggcagactgtccctgtcggaaaag
aagtttgactaccgacagtttgctgccattccttcttccaaacccgtatacgacatccag
tcccctgacgtggtcgatgacgttcagttaattgacgatggctccagtaacccagtgcat
gttgcggatcccgggactgaggtgcccactgccacctcggcgctggagatggccctctac
agcaacacgcgcaagctgaggcagggctgccgcagcctggagaccgccgtgcccacataa
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