Salmo salar (Atlantic salmon): 106578679
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Entry
106578679 CDS
T04363
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106578679
04121 Ubiquitin system [BR:
sasa04121
]
106578679
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106578679
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
106578679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
CTD
Motif
Other DBs
NCBI-GeneID:
106578679
NCBI-ProteinID:
XP_014013243
UniProt:
A0A1S3NCP4
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All DBs
Position
ssa19:30971071..30999249
Genome browser
AA seq
1126 aa
AA seq
DB search
MAECSVTDSPDLNPDGPSSRQKHNQHQSRRGRARVDHNRTWSSPNNYVPLPPQQPDHFHH
GVKSSHVHDNVLVNFHPPPHHREDVQRGRGRGGNGSCGRGGRGSRGRNPRWNRPGVEIGA
GPLGLPGGYHGLVGGGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPAHEDHQDTRP
KKPRRFSQEPRRGERSYKGPPHSLDKQENQENHATGGGGGGWDPVEPREETRLLEMGTRN
RKGGRTKDRNPRVDPQNKFQEPKRRQGPIKEYPQERKESERGASGRDILPAHHDKLGPST
KEEPNWRGQGKCTPLQDKGQRRTPNYDYRPGQKRRDNMPNKSKETQTGCLIEQLSEEKYE
CMVCCEVIRVMAPVWSCLSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPP
NTYKCFCGKVTNPEFQRSEIPHSCGDMCGKKRSGVDCKHPCNILCHPGPCPQCPAFVTKA
CICGRTSQPMRCGQATAIHCDKQCDLILNCTEHSCTQACHSGLCQPCQLQVQQVCYCGVV
SREVLCGTDKDCFDGSGHFSCQKACGKMLDCETHRCKQVCHRGPCQPCPRSPRLVRSCPC
GQTVLAKLLELGYPERRSCSDPIPSCGKTCNKPLPCGSNETIHICEKLCHEGCCGPCSLT
STIKCRCGSKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGAEHTCSLVC
GYKLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGGTVLFPPIACGTKPLECKNLCTRR
HKCDHQVFHNCHSEENCPPCTYLTQKWCMGKHEQRSNIPCHLQDISCGLTCNKVLLCDVH
RCRRICHRGECLAEGACRQPCVLPRADCGHPCNAPCHKGTSCPRNTCAAKVALQCDCGRR
KETVVCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQTKLECDEGCAALER
NRRLAVALQISPSVDPFNIRTSSSTYSDSLRVDARKDLKFVSEVEEEIKNLVELASKGKL
SKRSHCFPPMNREHRKIVHELAEVYNVESVSYDSEPKRNVVITAVRGKSACPNSTLTSLI
ERDTGVSRAPPPIAHIKQHSSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcacagactctccggatttgaatccagatgggccttcatcacga
cagaaacataaccaacaccagtccaggaggggtcgagccagagtggaccacaaccgtacc
tggagtagtcctaataattatgtcccactgccaccgcagcagccagaccattttcaccat
ggggtcaaatcatctcatgtccatgacaatgtcctagtaaatttccatcctcctccccac
cacagagaggatgtacagaggggtcgaggaagagggggtaatggaagttgtggacgaggt
ggccggggctcaaggggccggaatccgaggtggaataggcctggagttgaaattggcgct
gggccccttggcttacctgggggctaccatggactggttggtggtggtggaggctacagg
cctggaacactccacatggagaggggaccccccatagacgggcctagctggcgtcgagac
cctgggggccgggggggagaggtggggcctgcccacgaagaccaccaggacacccggcct
aaaaagccccggaggttcagccaggagccacggagaggagagaggagctataaaggacca
cctcattctctggacaagcaggagaaccaggaaaaccatgctacaggaggagggggcgga
ggctgggatccggttgagcccagagaagaaacccgattattagaaatgggaaccagaaac
cgtaaaggcggtaggaccaaggacaggaacccccgtgttgaccctcaaaataaattccaa
gagccaaagcgacgccaggggccgatcaaagaatatccccaggagaggaaggagtctgaa
aggggagccagcggcagagacatccttcctgcccatcatgacaaactgggccccagcact
aaagaagagcccaactggaggggtcaggggaaatgcacccccctgcaggacaaaggccag
aggagaacacccaactatgactacaggcctgggcagaagagaagggacaacatgcccaat
aagagcaaggagacacagacaggttgcctgattgagcagctgtctgaggagaagtatgag
tgcatggtgtgctgtgaggtgatcagggtgatggcaccagtctggagctgtctcagctgc
ttccatgtcttccatctcaactgcatcaagaagtgggcccgctccccagcctcacaggca
gacgaaacaaatgatgggtggaggtgtccagcttgtcagaatgttgtcttccaaccccca
aacacctacaagtgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatc
ccacacagctgtggagatatgtgtgggaagaagaggagcggcgtggactgcaagcacccc
tgtaacatcttgtgtcaccccgggccttgtccacagtgtcctgcctttgtcaccaaagcc
tgcatctgtggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgt
gacaagcagtgtgacttgatcctcaactgtaccgaacacagctgtacccaggcgtgccac
agcggactgtgccagccgtgccaactacaggtccagcaggtgtgctactgtggtgttgtc
tctcgggaggtgctgtgtgggacggataaagactgctttgacggctcaggacacttctcc
tgtcagaaagcatgtggcaagatgttggattgtgagacccaccgatgcaagcaggtgtgc
caccgtgggccgtgccagccgtgcccacgctcccccaggctggtgaggagttgcccctgt
gggcagacggtcttggccaagctcctggagctgggctaccccgagcgccgcagctgctct
gaccccatcccttcctgtggcaagacctgcaacaaacccctgccttgtggatccaacgag
accatccacatctgtgagaagctgtgccatgagggctgctgtggcccctgctcactcacc
tccaccatcaaatgcagatgtggctctaagatcaatgatgttccctgtgcaaccatccag
aatgaagatggactgatttttacctgtgagaagcgctgcctcaagaaacgctcctgtggc
cgacacaaatgtggcgagctgtgctgtgtgggtgcagaacacacatgctctctggtctgt
ggctacaagctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgc
cagccatgctggcaaaccagttttgatgagctggcgtgccactgtggggggactgtcctg
ttccccccaatcgcctgtggcaccaagcccttagagtgtaagaacctgtgtaccaggagg
cacaagtgtgaccaccaagtgttccataattgccacagtgaggagaactgcccaccctgt
acttacctcactcagaagtggtgcatgggaaagcatgagcaaaggagcaacattccgtgc
cacctgcaggacatctcctgtggtctgacctgcaacaaggtgctgctgtgtgacgtccac
cgctgccgccgcatctgccaccggggagaatgtctggccgagggcgcctgccgccagccc
tgtgtgctgccccgcgccgactgtggccacccctgcaacgccccttgccacaagggcacc
agctgcccacgcaacacctgcgctgccaaggtggcgctacagtgtgactgcggccggaga
aaggaaacggtagtgtgcacggaggcagccagtgcccatcagaggtatgcagccattgcc
atggccagtaagctgtctgacatgcagctgggtgactctgtagacatcggtctcatcact
aagaaggagatgaaacagaccaagttggagtgtgacgaagggtgtgctgcactggaaagg
aacaggcgattggctgtggccctgcagatttctccttcagtggaccccttcaacatccgc
acctcctcctccacgtatagtgacagcctccgagtagatgccagaaaagatctgaagttt
gtcagcgaggttgaagaggagatcaagaatctggttgagttggccagcaagggtaaactg
tccaagaggagccactgcttcccgcccatgaacagagagcacaggaagatagtccacgag
ctggctgaggtctacaacgtagagagcgtgagctacgacagtgagcccaaacgcaacgtg
gttatcaccgccgtcagggggaagtctgcctgtcctaactcaaccctgacatccctgata
gagagagatacaggggtctcaagggctcccccacccattgcccatatcaaacaacatagc
agcaagactgatggtgtgagcagctggtccaaggcggtcaaggaagagccggcgatcgac
tacttcgatgtccaggattaa
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