Salmo salar (Atlantic salmon): 106578897
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Entry
106578897 CDS
T04363
Name
(RefSeq) lethal(2) giant larvae protein homolog 2-like
KO
K06094
lethal(2) giant larvae protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106578897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106578897
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106578897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
PEP5_VPS11_N
PLN_propep
Motif
Other DBs
NCBI-GeneID:
106578897
NCBI-ProteinID:
XP_014013612
UniProt:
A0A1S3NDX2
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All DBs
Position
ssa19:42122276..42153248
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AA seq
1016 aa
AA seq
DB search
MKRFRRHGQESHRDRIKQELYGFNKTVEHGFPHQPSALVFSPTLQLLAIGTRSGAIKLYG
APGVEFMGLHDENAAVTQVHFLPQQVDLVTLLDDNSLHMWTLRAHQGVSELLEIGRFTLT
GPPGASPSVTRVTAVLTHSSGDLLFLGTEGGHVFVVEVPGFRELEERNISLENVTNSLPE
DYGGRRSLEHVESLQENPVNPRQVLIGYGRGIMVIWDLERQSAVKHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWMVAGEGTQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGDPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWEKVLSAGALQNTHYSKKPWPI
TGGQNLSPDAPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDAEPNDNMNQC
TEGEWPPFRKVGCFDPYSDDPRLGVQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVKEEPVRFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKSNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNSAAKVQEANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTLYFADTFLS
DSSHHTPSLWAGTNGGSVFAYQLRLPPVERRAEDPVSAHPAKEIQLMHRAPVVGIVVLDG
HGSPLPEPLEVAHDLARSADMQGCHQLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSNRSEDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVPSQTPSTTLPRAQPDGPSVKHRNSTRD
TDDMESSARRVMEHALLNDETVLQEIQKSLEGYQPTFLENNVKSALAGGKVLTNGD
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggacaggagtcccacagagatcggatcaaacaggagctc
tatgggttcaacaagacggtggagcatggttttccccaccagcccagtgctctggtcttc
agtcccactctacagctcctggccatcggcacacgctctggagccatcaaactttatggg
gctccaggtgtcgagttcatgggtctacatgatgagaacgctgccgtaacacaggtccat
ttcttaccacagcaggttgacttggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccaaggagtctctgagctgctggagataggccgcttcacacttact
ggaccaccgggtgcttctcccagtgtgactcgtgtgacggcggtgctgacccactcctct
ggggacctgttgtttctgggaacagaggggggacacgtgttcgtagtggaggtaccgggc
ttcagagaactagaggagaggaacattagcctggagaacgtcaccaacagtttaccagag
gactatggaggtcgtaggagcttggagcatgtcgagtccttacaggagaatcctgtcaac
ccacgccaggttctgattggctacggacgaggcatcatggtcatctgggacctggagcgc
caatcagccgtcaaacacatccccgctactcagcaactagagagcgtgtggtggacggag
gacggtggccatgttctcagttcccatagcgacgggagctactgtcgctggatggtggcc
ggggaggggacacagagcgaacaggagaagtctgaagtaccgtacggccacttcccctgt
aaggccatctctaaaatcatccagctccctacagaacaagggcctcctttcctgttcctc
agtggcggcatgccccgggccagctacggagacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttctttgtcatcagagac
ggaccagaccatacaggcgaccccagtgcgttggtggtcttagtagaggaggagttggta
gtgatagatctccagactgaagggtggccagtcatccagactccgtacctggtccctctc
cactgctctgccatcacctgctcccaccatgtctctgctataccactgaagctgtgggag
aaggtcctgtctgccggagcactgcagaacacacactactctaagaagccgtggcctata
acaggaggacagaacctgtctcccgacgctcctcagcgagacctacttctcacagggcac
gaggacggtacggtccgtttctgggatgcgtcgggggtctgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgacgcagaacccaatgacaacatgaaccagtgc
acggagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgatgac
cctcgcctgggcgttcagaagatccatctgtgtaaatacagcggttacctgactgtagct
ggcaccgctggacagatcctggtgttagagctgaatgatgaggcagcggaacagacggtg
gaagccacggtagctgacctgttacagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgaaggaggagccggtgaggttccccccaggattccagccctttgccctg
gtccagtgtcagcctcctgccgttgtcaccgccctaaccctgcactctgagtggaagcta
gtgaccttcgggaccagccacggcttcggactctacgactaccagcagaaaagcaacgtc
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtaaagagcattaagaagtctctccgccagtccttcaggaggatcagacgcagccgagtg
tctttacgcaaacaccacgtcaacagcgctgctaaggtgcaggaggccaatgctcgtctg
gaggctgagctagcagagatggagttggctcctgttcagagaaagatagaggctcgatcc
tcagacgactccttcactggcctcgttcgcacgctgtacttcgctgacactttcctctca
gacagctcccatcacacgccctctctctgggcagggaccaatgggggctcggtattcgcc
taccagctccgcctaccgcctgtggaacgcagagcagaggaccccgtctccgcccaccct
gctaaggagatccagctgatgcaccgtgctccagtcgtgggcatcgtggtgttggacggc
cacggttcccctctgcctgagcccctggaggtggcccacgacctggcccgctcagctgac
atgcagggctgccaccagctactggtcatatcagaggaacagttcaaggtgttcaccctg
ccgaaggtgagcgctaagatgaagttaaagctcaccgccatcgatggttcgcgcgtgcgc
agggtgggcgtggcctggttcggcagcaaccgctcggaggactacggtgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcattgccgggggtgaaattgcag
gtccagtacccctgtatccgcagagaggacgtcagcggcatcgcatcctgtgtcttcacc
aaacacggacagggtttctacctgatctctccgtctgagtttgagcgtttctctctgtcc
gctcgctgtgtggtggagcccaggtctctagtggaggtgccctcccaaacgcccagcacc
accctgcctcgggcgcagcctgacgggccgtctgtgaagcacagaaattccacgcgggac
accgatgacatggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgag
actgtgcttcaggagatccagaagtctctagaaggataccagccgacgttcctggagaac
aacgtgaagagtgctctcgctggagggaaggtgctgaccaatggagactga
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