Salmo salar (Atlantic salmon): 106578942
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Entry
106578942 CDS
T04363
Name
(RefSeq) neurexin-1a-like
KO
K07377
neurexin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106578942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106578942
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
106578942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
106578942
NCBI-ProteinID:
XP_014013705
UniProt:
A0A1S3NEP5
LinkDB
All DBs
Position
ssa19:complement(44553824..44627142)
Genome browser
AA seq
1503 aa
AA seq
DB search
MSVRVCVMAVCVGAAAPLLCVWLCLCSLGGSRGEVLEFGGVSGQWGRFPVWNACCESILS
FSVRTHSADGLLLYLDDEGFCDFLELLLLHGKLRLRFSIFCAEPAEVSSGVAVSDGHWHA
VRVKRDWRNTSLEVDGKMEGWAEVKSKRKDMTVFSHTFMGGVSPELHASPLRLTSPGVRD
HASFAGWLAGVTVNGSVAVLEGSEGVTVGDGCGPAHVCQNGGVCSVVEMRAVCDCTDTGY
KGNDCSEEHHKPGLAHLMIGDQGKLRAREDYVATFKGSEYFCYDLSPSPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVK
VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKVSGIVAFKCESVATLDPVTFDTPESFV
ALSKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKPLLLQVDFFAIE
MLDGHLYLLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSQRTAYTAPGDS
EILDLDDILYLGGLPEDRQGLIFPTEVWTALLNYGYVGCVRDLFVDGQSKDIRRLAEAQR
AVGVKPSCSREPPKQCLSNPCQHSATCREGWNRYVCDCSGTGYLGRACERDATILSYDGS
KFMKVQLPVSMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDC
IRINCTASKGPETIFAGLGLNDNEWHTVRVVRRGKSLKLTVDDLQSVEGQMAGDHTQLEF
HNVETGIVTEKRFMPAVPSNFIGHLQGLTLNGMPYVDLCKNGDIDYCELNAVIGYKSIVA
DPVTFRSRSSYVTLPTLQAYYSMHLFLQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHY
VSDLGNGAHLIKGNSNSPLNDNHWHNVLISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKG
DLYVGGVAKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATTGQVERGCEGTH
THTGPSTTCQEDSCASQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGVIVYT
WPPNERPSTRADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDI
NIEETAKFVNDGKYHIVRFTRSGGNATLQLDDLPIIERYPSGNIDNERLAIARQRIPYRL
GRIVDDWLLDKGRQLTIFNSQTTVTVGRGKEAGQFQGQMAGLYYNGLKILNMAAEGHAHI
RLEGSTRLVGDMPSSSITPQSSAAAGGNRLDPAANAGDITTTTATNKKQGGGTTQQSTDD
LLVASAECPSDDEDIDPCDPSSAAHPPLPEVKPFPGTSEVVRESSSTTGMVVGIVAAAAL
CILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGSTKDKPLGITKISKNKNNKDKE
YYV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcgcgtgtgtgtgatggcggtgtgtgtgggggccgcggcccccctgctgtgt
gtctggctgtgcctctgtagccttgggggatccagaggggaggtgctagagtttgggggg
gtttcgggacagtgggggcggttcccggtgtggaacgcgtgctgcgagagcattctgtcg
ttcagcgttagaactcacagcgcggacgggctgctgctttaccttgacgacgaaggattc
tgcgacttcttggaactcttgttgctacatggaaaactccgcctacgattctcaatcttc
tgtgccgagccagccgaggtgagttccggggtcgccgtgagcgacggccactggcatgcc
gtgcgtgtgaaacgggactggaggaacacaagcctcgaggtggatggaaagatggaggga
tgggcggaggtaaagagcaaacggaaagacatgacagtgtttagccacacttttatgggc
ggggtttccccagagctccatgcctctccgctccgcctcacttcccctggtgtaagagac
cacgcctcttttgctggctggctcgctggggtcaccgtcaacggatctgtggccgttctg
gaaggatcggagggtgttaccgtgggagacgggtgtgggccggcccacgtgtgtcagaac
ggaggggtgtgttctgttgtcgagatgagggccgtctgcgactgtaccgacaccggctac
aaaggcaacgactgcagcgaagaacaccacaagccaggtctggctcacctgatgatcggc
gaccaaggaaagctcagagcccgtgaggactacgtagcaacctttaaggggtcagagtat
ttctgctatgacctgtctcccagccccatccagtcctctagtgatgagatcaccctgagc
tttaagaccctgcagaggaacggcctgatgctccacacgggcaaatcagccgactacgtc
aacctggccttaaagaacggagccgtgtcactggtcatcaacctggggtccggggccttc
gaggccctggtggagccggttaacgggaagtttaacgataactcctggcacgatgtcaag
gtcacacgcaacctgagacagcactcaggcattggacacgctatggtgaccatctccgtg
gacggcatcctgaccactacgggctacacccaggaagactacaccatgttgggctcagac
gatttcttctacgtgggaggaagtcccagtactgctgacctccctggatctcctgttagc
aacaacttcatgggctgccttaaagaggtggtgtataagaacaatgatgtacggttggag
ctgtctcggctggctaagcagggagatgctaagatgaaggtgagcggtatagtggcgttt
aagtgtgagagcgtggcgaccctcgatcccgtgacctttgacaccccagaatcgtttgtg
gcattgagcaagtggagcgccaagaaggcagggtcaatctcctttgactttagaacgaca
gaacccaatggactgatgctcttcagccacgggaaaccacggcaacagcaacgcaaagac
ccccgcacaccccccaccctaaagccgttactgttgcaggtggatttctttgccatagag
atgctggatggtcacctgtaccttctattggacatgggctcaggaaccaccaagaccaag
gccatcgacaggaaggtcaacgatggcgaatggtaccacgtcgacttccagagggacgga
cgctcaggtactatctcagtgaactcacagcgtacagcatacaccgctccaggggacagt
gagattctagacctggatgatatcctgtacctgggaggattaccggaggaccgccaagga
ctcatcttccctactgaggtgtggacagcgttgttgaactatggatatgtgggctgtgtg
agagacctgtttgtggacggtcagagtaaagacatccgtcgtctggctgaggctcagagg
gctgtaggggtgaaaccttcctgctccagagagccccctaaacagtgtctgtccaacccc
tgccaacacagcgccacctgcagggagggctggaacagatatgtgtgtgactgctctggg
accggatacctgggacgggcctgtgagagagatgcgaccatcctatcctatgatggtagt
aagttcatgaaggtccagttgcccgtatcgatgcacaccgaagcagaggatgtgtcgcta
cggtttcgctcccagcgggcctacggtgttctcatggcaacaacatcacggaactcagcc
gacacgctccgactggagctggatggtggtcgtgtccgactcactgtcaacctagactgt
atcaggattaactgtactgccagtaagggtccagagaccatctttgcagggctggggctg
aatgataatgagtggcacactgtcagagtggtgcgacgtgggaaaagcctcaaactcacc
gtcgacgacctgcaatctgtagaaggtcagatggcaggcgaccacacccagctggagttc
cacaacgtggagacaggcattgtgacggagaagcgcttcatgcctgctgtgccttccaac
ttcatagggcacctgcagggcctcaccctcaacgggatgccctatgtagacctctgtaag
aacggtgacatcgactattgcgagctgaacgctgtgattggttataagagcatcgtggca
gacccggtgacattcaggtcacggtcgagctacgtgaccctgcccacgctccaggcctac
tactccatgcacctgttcctccagttcaaaaccacctcccctgacggactcgtactctac
aacagaggagacggaaacgacttcatagtggtggagctggtcaaaggctacctccactac
gtgtccgacctggggaacggggctcacctgatcaaaggcaactccaactctcctctgaat
gacaaccactggcacaacgtcctcatatccagagacaccaacaacctgcacactgttaag
atagacaccaaggtcactacacagaccactatgggggccaagaacctggatctcaaaggt
gacctgtacgtagggggcgtggctaaagagatgtaccgtgaccttcccaagctcgtccac
tcccgcgaaggcttccagggttgcctagcaaccgtcgacctcaacggccgattgcccgac
ctgctggccgacgcccttgctacgaccggacaggtggagaggggctgtgaaggtacacac
acacacacaggtcccagtactacctgtcaggaagactcctgcgccagtcagggcgtgtgt
ttacagcagtgggagggatttagctgtgattgcagtatgacatcatttgggggaccgctc
tgcaatgacgcggggaccacttatatctttggccgtgacgggggtgtgatcgtgtacacc
tggcctcctaacgagagacccagcacacgggctgaccggcttgcgctgggcttcagcaca
cagcagaaacacgctactctgctacgggttgacagcgcctcgggactgggggactaccta
cagctacagatagataaaggaaatattcgggtagtgtttaacgtggggacagatgacatc
aacattgaagagactgctaaattcgttaatgatgggaagtaccacatagttcggtttacc
cgcagcggaggcaacgcaaccctacagctggacgacctgccaatcatagagcgctacccc
tcaggcaacattgataacgagcgcctggccatcgctagacagagaatcccctatcggctc
ggtcgaatagttgacgattggctactcgacaaaggccgccagctgaccatcttcaacagc
cagacgacggtgacggtgggaagaggaaaggaagcaggtcagttccagggtcagatggcc
ggtctctactacaacggactgaagatactcaacatggccgccgagggacacgcccacatc
cgcctggagggcagcacacgattggttggggacatgccctcttcctccatcacgccccaa
tccagcgctgccgccgggggcaaccgattagatcccgccgccaatgccggcgacatcacc
acgacaaccgccacaaacaagaagcaaggaggaggaactacgcagcagtcgacagacgac
ctgctggtggcatcagctgagtgtcccagtgatgacgaggacattgacccatgtgacccc
agctctgcagcccacccccctctcccggaggtcaagccgttcccggggacgtcggaggtg
gtgagggagtccagcagcaccacgggcatggtggtgggcatcgtggcagctgctgccctc
tgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcctac
cacgtggacgagagccgcaactacatcagtaactctgccacccagcctaacggcagcacc
aaggacaagccgctgggcatcaccaagatctccaagaacaagaacaacaaagacaaggaa
tactacgtgtga
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integrated database retrieval system