Salmo salar (Atlantic salmon): 106579024
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Entry
106579024 CDS
T04363
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106579024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106579024
Membrane trafficking [BR:
sasa04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
106579024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
Motif
Other DBs
NCBI-GeneID:
106579024
NCBI-ProteinID:
XP_014013900
UniProt:
A0A1S3NF80
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Position
ssa19:49009933..49200578
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AA seq
224 aa
AA seq
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MSSDFEAYEQDFGTLTAEITNKIGRIPKLGGEEKTQLVLNVDKQLEEVRELMEQMDLEVR
ELPIQIRGMYQSRLKSYKGEMEKLEKDFKRSRIAYSDEVRNELLGEDAGSSESQLIKLRE
ERAHLLDNTEKLERSSRRLDAGYQIAVETEQLGQEILANLHTDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIQNRVLVFVLGAIILITIILAIYFNVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagattttgaagcctatgaacaggactttggaaccctgacagcagaaataacc
aacaaaattggaaggattcccaaattaggtggagaggagaagacacagctggttctaaat
gtcgacaaacagctcgaagaagtcagagagttgatggagcagatggatctggaggtgcgt
gagctccccatccagatcagaggcatgtaccagagcagactgaagagctataagggggag
atggagaagctggagaaagactttaaaaggtcacgtatcgcctacagtgatgaggtgcgg
aacgagctcctgggggaagacgctggctcctctgagagtcagttgatcaagttacgtgaa
gagagagcacatctgttggacaacacagagaagttggaaaggtcatctcggaggctggac
gcaggctaccagatagcagtggaaaccgaacaattgggccaagagatcctggctaaccta
cacaccgaccgcgagaagatccagagatccagagatcggctgagagagacagacgccaac
ctgggcaagagctcccgcatcctaaccggcatgctgagaagaatcatccagaacagagtc
ctggtcttcgtcctcggcgccatcatcctcatcaccatcatcctggctatctatttcaat
gtgcgagggcactga
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