Salmo salar (Atlantic salmon): 106579026
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Entry
106579026 CDS
T04363
Name
(RefSeq) transcription factor 7-like 2
KO
K04491
transcription factor 7-like 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
sasa04520
Adherens junction
sasa04916
Melanogenesis
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106579026
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106579026
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
106579026
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106579026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106579026
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
106579026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106579026
NCBI-ProteinID:
XP_014013904
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Position
ssa19:49215052..49330895
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AA seq
645 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVNHGSLQSRQALKDARSPSPAHIVGPFCLEFPGQSDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQGDVDPKTGIPRPPQHPDISPYY
PLSPGAVGQIPHPLGWLVPQQGQPVYQGFRHPYPTALTVNASMQSFLSSRFPHHMVPPHH
SLHQTGIPHPAIVTPNVKQESSHSDIGLNSSTILYTLHRKHQDSKKEDEKKKQPHIKKPL
NAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLY
PGWSARDNYAANQQGKKKKRKRDKQPGEGNEHREYFPNPCLSLPPITDLSAPKKCRARFG
LDQQNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLDSPPSSPSSVAPSPSSKESRPQ
TEQMQPLSLTMKPAHQPLHYPHRHLLAGHPPPPSLVLLENSAAAAGKTPGAVHNGAHGDV
SSSRQPGSSGAALARPLAASLCHSHSLHPNSTAPQPLSLVTKSIE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggcggtggaggggacgatttgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggggagcaggaggaaaaaatttcggagaatttatcagcagaaagggat
ttagcagatgtcaaatcttctcttgtaaatgaatcagaaacaaatcaaaacagctcgtcg
gattcggaggcggaaagacggcctccgcctagatctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgatccccgatcttacaagcccgtaccttccgaatggatca
ctttctccaacagcacgcacatacctacagatgaaatggcccctgctagatgttaaccac
ggaagtcttcaaagtagacaagcacttaaagatgcccggtccccgtcaccggcgcacatc
gttgggcccttctgcttggaattccccggacagtcagatctgagccttcaccaatttcag
ttgtctaataaggtcccagtggtacagcaccctcaccacgtgcacccgctcacgcctctg
atcacctacagcaatgaacacttcacaccgggcaacccccctccgcacctacagggagat
gtggaccccaaaacaggaattccaaggcctccacaacacccagacatatctccctattac
cctctctcacctggtgctgtaggccagatcccccatccgctcgggtggttagtaccacag
caaggtcaacctgtttaccagggttttagacacccctacccgactgcactcactgtcaac
gcatccatgcaaagttttctgtcctccaggttccctcaccacatggtcccacctcaccac
agtttgcaccagaccggaatcccccaccccgccatcgtcacgcccaacgtcaagcaagag
tcctcccacagcgacatcggcctcaacagctctactatactgtacacgctccacaggaaa
caccaggactcgaaaaaggaggacgagaagaagaagcagccccacatcaagaagccgctg
aacgcctttatgctctacatgaaggagatgagggccaaggtggtggccgagtgcacgttg
aaagagagcgccgccattaaccagatactgggacgaaggtggcacgccctaacacgagag
gagcaggcgaaatactacgagctggccaggaaagagcgacagcttcacatgcagctctac
cccggctggtccgcacgagataactatgcggctaaccaacagggcaagaagaagaagagg
aaaagggataagcagccaggagagggcaatgaacacagagaatattttcccaacccttgc
ctttcactccctccgattacagacctgagcgctcctaagaagtgtcgagcgcgctttggg
ctcgatcagcagaataactggtgtggcccgtgcaggagaaaaaaaaagtgcattcgctac
atccaaggtgaaggtagttgtgccagtcctccctcttcggacggcagcttactagactcc
cccccatcctccccctcctcggtggccccctccccctcctcgaaagagtccagacctcag
actgaacaaatgcaacctctctcactgactatgaaaccggcccaccagcctctccactac
ccgcaccggcacctcctggctgggcatcctcctccgccatctttggttctgctggaaaac
tctgctgctgcagcgggcaaaactcctggcgcagtgcacaacggagcgcacggcgacgtc
tcgtcctcgcggcagccgggctcctcgggcgccgccctggccaggcccttggcagcatcg
ctgtgtcattcccactcgctacaccccaactccacggcccctcagcctctgtcgctcgtt
accaagtctatagagtag
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