Salmo salar (Atlantic salmon): 106579054
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Entry
106579054 CDS
T04363
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106579054
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106579054
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
106579054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
nSTAND3
AAA_22
AAA_11
Motif
Other DBs
NCBI-GeneID:
106579054
NCBI-ProteinID:
XP_014013967
UniProt:
A0A1S3NEY8
LinkDB
All DBs
Position
ssa02:complement(18666843..18829545)
Genome browser
AA seq
1763 aa
AA seq
DB search
MISVLLQRRSSIVDSLLSIPADRINYPPDGSRKGGRGEGSSKPTYSCQVTIQSGKVKEMM
KMHRRERKRERKRGERRWDDTESSSDLYIGPKEMRAQREQALLTARRSPVLSRERVYELV
RYPNVYDCYAEATKTSAFVGGAKLMIPEGIKRENNKMYEEVEIPPSDPIGFEEKPIYISE
LDEVGQLVFKGMQRLNRIQSIAFETAYNTNENLLISAPTGAGKTNIAMLTVLREIRQHLQ
PGGVIKKDEFKIVYVAPMKALAAEMTIYFSKRLEPLGIAVKELTGDMQLTKGKILHTQML
VTTPEKWDMVARKSVGDVVLSQIVKLLILDEHCSRKEKDRVFSSLVSKKRQVESTQSMIC
ILGLSATLPNYLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKTTNKVTTNTHTQTH
TGQEVCFTTLIRVSVLCVTQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHLPDYG
QCEKLIQRSRNKQMKEMFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVN
LPAHAFIIKGTQIYDAKRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYL
TLLTQQNPIESQFLDTMADNLNAEVSLGTVTNVEEAVRWLSYTYLYIGVRANPLAYGINH
KAYQVHTHSCAHGPGLELYCKELVVMAARKLDKARMIRFEERAGYFASTXLGRTASHFYI
KYNTMEMFNELFNSQKTEADILSIASKAEEFEQVKVRDEEKEELEQMLCNYRELPAAGGV
ENGYGKIIILLQTYIGGGEVDSFSLISDLSYVAQNTARIVRALFEIDLRKRWPALTHRLL
NLCKVIDKRLWGFAHPLRQFSILPHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGL
KVKQCVHQIPSILIEATIQPITRTVLRVRLQITPDFKWHDQCHGSVGEPWWLWVEDPIND
HIYHSEYLLLQKKQVVSGEPQQVVFTIPIFEPMPSQYYISAVSDRWLGSEAVCIINFQHL
ILPERHPPHTELLDLQPLPITALGNPEYESLYKFTHFNPIQTQIYXQIYHTDTNVLLGAP
TGSGKTISAEMAMFRVFNHYPTSKVVYIAPLKALVRERIEDXKIRIEEKLGKKVVELTGD
VTPDMQAIATADLIVTTPEKWDGVSRSWXNRSYVQKVAILIIDEIHLLGEDRGPVLEVIV
SRTNFISSHTNKTVRVVGLSTALSNSLCLFASPPLLQVGLFNFRPSVRPVPLEVHIHGFP
GQHYCPRMASMNKPVFQAIRSYSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLH
QDETQMTDIIATVRESNLKLTLAFGIGMHHAGLHKRDRKTVEELFVNCNIQLQSNRGCVL
SSYYSLDDISHETINKYLSNLVERSLRDLECSYCMEIGEDDCTIEALTYGRISSYYYLKH
QTVGMFKERLRAELPIQDILSVLTLPCSDYGTDTKTMLDNTIRICQAVLDVAANEGWLVT
ALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLYLFSRWSSKKGRGGARGFHGPIEGLPE
LIASCEGRENTFAAILGEEFQPRQISQAWSFLSHLPVVEVRLSVKGWWEGCGEXAEHPLP
AAGGKLRDDRSXLDVHADQEYVLQVSLQRINTGXXRRKQDSKAQAPRFPKNKDEGWFLVL
GEVERRELLAVKRIGYCRHRSTVSLAFYTPEKTGKCIYALYLMSDSYLGLDQQYDLHRSV
TPACIAAQVNSEVTEAMGGMSVK
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgttctcctccagagaaggtcttccatcgtggattctctcctttccatccct
gcagacaggatcaactacccaccagatggtagccgtaaaggaggcagaggagaggggagc
agcaagcccacgtacagctgtcaggtgaccatccagtcggggaaggtgaaagagatgatg
aagatgcaccggagggagaggaagagggagaggaagaggggggagagacgctgggatgac
accgaatcctcttccgacctctacattggccccaaggagatgagagctcagagagagcag
gccctgttgacagcacggcggtctccagtgctgagcagagagagggtgtacgaactcgtc
cgctaccccaacgtctatgactgctacgccgaggccaccaagacctccgccttcgtaggg
ggagccaagctgatgataccagaggggataaagagagagaataataagatgtatgaagag
gtggagattcctcctagtgatcccatcggctttgaggagaaacccatctacatctccgaa
ctggacgaggttggtcagttggtgtttaaggggatgcagcgtctgaacaggatccagtcc
atagcgtttgagacggcctacaacaccaatgagaacctgctaatctctgcccccactgga
gccggcaagaccaacatcgccatgctgacagtcctccgtgagatcagacagcacctccaa
cctggaggggtcatcaagaaggacgagttcaagatagtgtatgtagctcctatgaaggcc
ctggcagcagagatgacgatttacttcagtaagcggttggagccactgggcattgctgtc
aaagagctcactggagacatgcagctaaccaaagggaagattctgcatacacagatgctg
gtgaccacccctgagaagtgggacatggtggccaggaagagcgttggggacgtggtcctg
tcccagattgtaaagctcctcatcttggacgagcactgttctcggaaggagaaggacagg
gtctttagttctctggtttccaagaagagacaagtggagtcgacccagagtatgatctgt
atcctgggtctgtcggccacgctgcccaactacctagacgtggcctccttcctccacgtc
aacccctacatcggactcttctacttcgacagccgcttcagacccgtgcccctcggacag
agcttcgtaggcattaagaccaccaacaaggtgaccacaaacacacacacacaaacacac
actggccaggaggtttgttttaccacactgatccgtgtctctgttctctgtgtgacccag
gtgatggtgtttgtccatgctcgtaatgccacggtgaggacagccatggggctgatcgag
atggctaagaaccgtggagagtcttccttcttccagccagaccatttacctgactacggc
cagtgtgagaaattaatccagcgttccaggaacaagcagatgaaggagatgttcccagat
ggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctgatggagagcatg
ttctccaggggttacctcaaggttctgtgttgtactgccacactggcctggggagtcaac
ctgcctgcacacgctttcatcatcaagggcacccaaatctacgatgctaagcgtggtacc
ctggtggacctgggcatcctggatgtgatgcagatcttcgggcgtgccgggcggccccag
tttgacaagtacggcgagggcaccatcatcacggcacatgacaagctgagccactacctc
accctgctcacgcagcagaaccccatagagagccagttcctagataccatggctgataac
ctcaacgctgaggtatcactagggactgtgactaacgtggaggaagcagtgaggtggctg
agttacacctacctgtacataggcgtgagagccaaccctctggcctacgggatcaaccac
aaggcctaccaggtacacacgcattcatgcgcacatggaccaggtctggagctgtactgt
aaggaactggtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgag
gagagggcaggatacttcgcctccactngtctgggcagaaccgccagtcacttttacatc
aaatacaacaccatggagatgttcaacgagctgttcaactcccagaagacagaggctgac
atcctcagcatcgcctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggag
aaggaggaactagagcagatgctgtgtaactaccgtgagctgcctgctgcaggcggagtg
gagaacggatacggcaagatcatcatcctactgcagacctacatcggcgggggagaggtg
gacagcttctccctcatctcagacctgtcctacgtagcacagaacacagctcgtattgtc
agggctctgtttgagattgatctgaggaagcgttggcctgccttgacccaccgcctgctc
aacctgtgtaaagtgatagacaagcgtctgtggggcttcgctcaccccctgagacagttc
tccatcctgcctcacaacgtgctggcccgtctggaggagaagaaactcactgtggacaaa
ctgaaagatatgcagaaggacgagataggtcacatgctccaccacgtgaacatcgggttg
aaggtgaagcagtgtgtccaccagatcccttccatactgatagaggccacaatccaacca
atcacacgcaccgtgctcagggtccgcctccagatcacccccgacttcaagtggcacgac
cagtgtcatggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgat
cacatctaccattcagagtacctgctcctacagaagaaacaggtggtgagtggggagccc
caacaggtggtgttcaccatccctatctttgagcccatgccctcccagtactacatcagc
gctgtgtcagaccgctggctgggctcagaggctgtctgcatcatcaacttccaacacctc
atcctgcctgagagacatcccccacatactgagctgctggacctgcagccgttgcccatc
accgccctggggaacccggagtacgagagtctgtacaagttcacccacttcaatcccatc
cagacacagatctacnnacagatctaccacaccgacaccaacgtcctgctgggggcgcca
acgggctccggtaaaaccatctctgccgagatggccatgttcagagtcttcaaccattac
cctacctctaaggtggtgtacattgcccctctgaaagctctggtcagggagaggattgag
gactagaagatcaggatagaggaaaaactggggaagaaagtcgtggagctgacaggtgat
gtgactccagacatgcaggccatcgccacggccgacctgatcgtgaccacaccggagaag
tgggatggcgtgagtcgctcctggtagaaccgcagctacgtccagaaagtagccatcctc
atcatcgatgagatccacctgctaggggaggacagaggtcctgtgctggaggtcatagtg
tccaggaccaacttcatctcctcccacaccaacaagactgtccgcgtggtgggcctgtct
acggcactgtctaactctctctgtctctttgcctctccccctctcttacaggtgggtttg
tttaacttccggccctctgtgcgtcccgtcccattggaggttcacatccacggcttccca
ggacagcactactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgc
agttactctccagccaagcctgttctgatctttgtgtcgtcgcgacgacagactcgtctg
acagctctagacctgatagccttcctggccaccgaggacgaccccaaacagtggctgcac
caggacgagactcagatgacagacatcatcgccacggtgagggagtccaacctgaagctg
acgttggcgtttggtatcggcatgcatcacgctggactacacaagagagacaggaagact
gtggaggaattgtttgtcaactgcaatatccagttacagtctaaccgtggttgtgtgttg
tccagttactacagcctggatgacatcagccacgagaccatcaacaagtacctgtccaac
ctggtggagaggagtctccgagacctggagtgttcctactgtatggagataggagaggat
gattgcaccattgaggccctgacgtacggtcgtatctcctcctactactacctgaagcac
cagacagtcgggatgttcaaggagaggctgagggctgagctgcccatccaggacatcctc
tctgtcctcacgctgccctgctccgactacggcaccgacaccaagaccatgctggacaac
accatacgcatctgtcaggccgtgctggacgtagcagccaacgagggctggctggtgact
gctctcagcatctgtaacctggtgcagatgatcgttcagggcaggtggctcaatgactcc
tctatactgaccctacctaccatagagcagcaacacctctacctgttcagcaggtggagc
tccaaaaaagggaggggcggagccaggggcttccacggaccaatagaagggctccctgag
ctgattgcctcctgtgaggggcgggagaacaccttcgctgccatcttgggggaggagttt
caaccccgtcagatctcccaggcctggtcgttcctcagccatctgcccgtggtggaggtg
cgtctaagtgtgaagggttggtgggaggggtgtggggagtaggcagagcaccccctccct
gcggccggggggaagctcagggacgacagaagctgactggatgtccacgctgaccaggag
tacgtcctgcaagtctcactgcagcgcatcaacaccggctagtagaggaggaagcaggac
agtaaggcccaggcccccaggttccccaagaataaggatgagggctggtttctggttcta
ggagaggtggagcgcagagagctactggccgtcaaacgcatcggatactgccgacaccgc
agcaccgtttccctggccttctacacccccgagaagaccggaaagtgtatctacgcgcta
tatttgatgagtgacagttacctgggtctggaccagcagtatgacctccaccgcagcgtg
acccctgcctgcatcgctgcccaggtcaacagtgaagtcactgaggccatgggaggcatg
tccgtcaagtga
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integrated database retrieval system
