Salmo salar (Atlantic salmon): 106579094
Help
Entry
106579094 CDS
T04363
Symbol
smarcd2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106579094 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106579094 (smarcd2)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106579094 (smarcd2)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106579094 (smarcd2)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106579094 (smarcd2)
PBAF complex
106579094 (smarcd2)
GBAF(ncBAF) complex
106579094 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
106579094
NCBI-ProteinID:
XP_014014117
UniProt:
A0A1S3NFC7
LinkDB
All DBs
Position
ssa19:complement(59144599..59169435)
Genome browser
AA seq
494 aa
AA seq
DB search
MASRGGFPATQINPSVNPMNAGHAGGGMRMPGIQQNSGFRAMNATPQYHQHPGMPPNRGI
SMGPIGGPGPSYGGGNMPLRIGMGQSAMDASRKRFLQQQPQGGLGGPRRGKRRRMADKVL
PQRIRDLVPESEAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPG
KPEGEEAEKVSSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRM
PTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWL
YIKNNKLQDSHEKEYINCNRYFRQILGCTRMRFSEIPMKLAGLLQHPDPIIINHMISVDP
NDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFM
LSFSNNPQDFIQDWLKSQSRDLKLMTDVAGNPEEERRTEFYQAPWVPEAVGRYVYSKVQQ
RRQELEQVLGIRLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagagggggctttccggctactcagataaaccccagtgttaaccccatgaac
gctggacatgcaggcggtggaatgaggatgccaggaatccaacagaattcgggtttccga
gccatgaatgccactcctcagtaccatcagcaccctggtatgccacccaacagggggatc
tcgatggggccaattgggggccctggaccctcttatgggggcgggaacatgcccttacgc
ataggaatggggcaatcagccatggacgcctcccgaaagcgattccttcaacaacaaccg
caaggggggctgggaggcccaaggcgtggcaaaaggcgcaggatggccgacaaggttcta
ccacagaggatccgagacctggttccagagtctgaggcctatatggacctgctggccttt
gagaggaagttggaccagaccatcgcccgcaaacgcatggagatccaggaagccatcaaa
aagcccattacgcaaaagcgcaagttgaggatctacatatccaacacctacacacccggc
aagccagaaggcgaggaggcagaaaaagtgtcatcctgggaactaagggtggaggggaaa
ctccttgaggatcctgggaaacagaagaggaagttttcgtctttctttaagagtctggtc
attgagctcgacaaggaactgtatggacctgataaccacttggtagagtggcacaggatg
cccaccacccaggagacagacggcttccaggtgaaaagaccaggggacgtgagcgtgaaa
tgcaccctgctcctaatgctggaccaccagcccccacagtacaagctggacccacgactg
gcccggctactaggtgtacacacccagacacgggctagcatcatgcaggcgctgtggctc
tacatcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaaccgc
tacttcagacagattttaggctgcacacgtatgcggttctctgagattcccatgaagctg
gctggcctgctgcagcatcctgaccccatcatcatcaatcacatgatcagcgtggacccg
aatgaccagaagaagacggcgtgctacgacattgacgtggaggtggacgatcctctgaag
gcccagatgaatagtttcctgtcctcaactaccaatcaacaggagatcgccgccctggag
atgaagatccacgagaccattgagtctatcaaccagctgaagacccagcgagacttcatg
ttgagcttcagcaacaacccgcaggacttcatccaggactggctcaagtcccagagtcga
gacctcaagttgatgacagacgtggcaggtaacccagaggaggagaggaggactgagttt
taccaggccccctgggtaccagaagctgtgggccgatacgtctactctaaggtgcagcag
agaagacaggagttggagcaggtgctgggaattcgactcacctga
DBGET
integrated database retrieval system
