Salmo salar (Atlantic salmon): 106579145
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Entry
106579145 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106579145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106579145
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106579145
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
HECT type E3
106579145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
106579145
NCBI-ProteinID:
XP_014014223
UniProt:
A0A1S3NFJ3
LinkDB
All DBs
Position
ssa02:16496862..16546502
Genome browser
AA seq
2919 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGGGGGSSSVGGAGGGGVGGAVSGGGGGGSSGRS
STAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIR
ELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDA
DAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGAS
FDTERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAVSSK
GELYQWKWSEPEPYRNTQNPSIHHPRVSFLGLTNEKITLLSANSIRATVATETNKVATWM
DDTLSSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLESSLYWWGVVPFSQRKKMLE
KARAKNKKPKSSAGISSVPNITVGTQVFVSSLQVCLRNNPLYHAGAVAFSVNAGIPKVGL
LLESVWNMNDSCRFQLRSPESLKNMDKTTKTQEINPTHSCLRTESKPELVKTEMGPPPSP
ASTCSDTSSIASSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKV
DGAYVAVKFPGTSSSVSTQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKV
PDCFQRTPKKLCIPEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTS
NLAFLGQSERNVAIFTAGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLGMG
VHSLANLPTNSTIKKKAAIIILAVEKQTLMQHVLRCDFEACRQYLVNLEQAVLLEQSPHV
LHSFLGHRCDGNRNILHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAIS
VVSSNSSGNRTGSSSSRGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWV
PDPPPMDPDGDIDFILAPAVGSLTTASTGTSQGPSTSTIPGPSSEPSVVESKDRKANAHL
ILKLMCDSMVLRPHLRELLSAKDARGMTPFMLAVSGRAYPAALTVLEAAQKMAKVGEPGM
TEKVDADSLFMEMICPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLES
LCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNL
VTSPNSRGEHILLFLVQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRF
AQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFT
HCLIVKCAPDITVSRFIDTLLGTLVKELQNKYTPGRREEAIVVTRRFLRSVARVFVILSV
EMASSKKKNNFIPQPIGKCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLAS
TSIDAVQGSEELFSVEPLPPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQ
DDIVSADVEEVEVVEGVAGEEDHHEDQEEQGEQGEENAEAEGQHDEHDEDGSDMELDLLA
AAETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSS
SQSDDVDQETFLLDEPLERTTTASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPA
AASSTGLIYIDPSNLRRSSAISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISD
LMSLIPKYNHLVYSQYPAAVKLTYQDAVNLQNFVEEKLIPTWNWMVSIMDSTEAQLRYGS
ALSSAGDPGHPSHPLHASQHSARRERMTAREEASLRTLEGRRSGRAATLLTVRQGMMSAR
GDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDR
KRSREILELGLDNEDSEHENDEDTNQSCFLVLEGRQARRKAVRQKRGKKKRAAPKGSTLQ
DKEDDPVPAETGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKED
LFGRPSQGLYSSSYTASKGLAEATLDRSCLEVNMGSSQILPTKMSYSANLKNVMSMETSQ
RGREDQPMDQELVAPKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLPSFRPHCSFMGMVI
SHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDL
ALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIA
LAFLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSSMTLNLMQRLRNRDRERERRSGGLRA
GSRRDRDRDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFAS
KITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQ
QQENRKRHGSTRSVVDMELDDPEDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIG
RILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEAEA
VFAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHA
MRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGTKTLARIHKESQ
RENADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQ
HLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8760 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacacttcgtggttcacccgttgcccgggactgaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggccaccttaaaacagtgtgtagttggcccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagccagatcgtctggag
ctgaccaaaccagatggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggtggaggaggaggaggaggaggtggtggcggcagcagcagtgtaggaggtgcaggg
ggaggaggtgtaggaggagctgtcagtggaggaggtggtggaggctcctctgggaggtcg
tctacagctgccagggactcaagacgtcagaccagggtgatccgcacagggagggaccgg
ggctctggtctcctgggtagccagccccagcctgtcatccctgcctcggtcatcccagag
gaactcatctcccaggctcaggtggtcctccaggggaagtctaggagtgtgatcatccgg
gagctccagaggaccaacctggatgtcaacctggccgtcaacaacctacttagcagagac
gatgaggacggtgacgatggtgatgacacagccagcgagtcctacctccctggagaggac
ctgatgtccctgctggacgctgacatccactcagcccaccccagtgtcatcatcgatgct
gacgccatgttctctgaggacatcagctacttcggctacccttccttcagacgctcctcc
ctgtcccgcctgggctcctcgcgagttctccttcttcccttagagcgtgactcagagctg
ttgcgtgagcgcgagtctgtgttgaggttgcgggagcggaggtggctggatggggcctca
tttgacacggagaggggctccaccagccgcgagggggagcccagcctggacaagaagaac
atccccgtccagagccctgtctctctgggcgaggagctgcaatggtggcctgacaaggat
ggtgtgaagtttgtgagcatcgggtccttgttctctgagctggtggcagtgagctctaag
ggggaactctaccagtggaagtggagtgaaccagaaccatacagaaacacacagaaccct
tctatccaccacccccgggtgtccttcctgggcctgaccaatgagaagatcaccctgctg
tctgctaacagcatcagagccaccgtggccacggagaccaacaaggtggcaacctggatg
gatgacacactgagcagcgtggcatccaagctggaacacagtgcccaggcctaccctgag
ctgcagggagagcgcatcgtgtctctgcactgctgtgccctctacacctgcgcccagctg
gagagcagcctgtactggtggggtgttgtgccttttagtcaacggaaaaagatgcttgaa
aaggctagagccaagaacaagaagccaaagtccagtgccggcatctcctcagtacccaac
atcaccgtgggaacgcaggtgtttgtgtcctctctccaggtgtgcctgaggaataacccc
ctctaccacgccggtgccgttgccttttctgtcaacgctgggatccccaaggtgggactc
ctcctcgagtctgtctggaacatgaacgacagctgcaggttccagctgcgatcaccagag
agcctcaagaacatggacaagaccaccaagacccaggagatcaatcctacccattcttgc
cttagaacggagagcaagccggagttggtaaagaccgagatggggccccctccttccccg
gcctccacctgcagtgacacctcctccatcgctagcagtgcctcgctgccctacaaacga
agacgctcgaccccggctcccaaagaggaggagaaggtgaacgaggagcagtggcctctt
cgggaagtggtgtttgtggaggatgttaaaaatgtccctgtgggaaaggtgctgaaagtg
gacggtgcgtatgtagctgtgaagtttccagggacgtcaagcagcgtgagcacacagccg
agtcagactagtgctccagctcccatcactgactctgacccctcctcactgctgcaggac
tgtaggctgctcagaatagatgagttacaggtggtgaaaactggtggaactcctaaagtt
ccagattgcttccagcgtacacctaaaaaactctgcatcccagagaaggctgagattctg
gctgtgaatgttgactccaaaggagtccacgcagtgctgaagactggtaactgggtgagg
tactgtatctttgacctggccacaggcaaagcagaacaggagaataacttccccaccagt
aacctggccttcctggggcagagtgaacgcaacgtagcaatattcactgcaggacaggat
tccccagtcatccttcgggatggaaatggcacaatttacccaatggccaaagactgtatg
ggcggcatccgagaccctgagtggctggacctgccgcccatcgccagcctgggcatgggg
gtgcactccctggccaacctccccaccaactcaaccatcaagaagaaagctgctattatc
atattggctgtggagaagcagacgttgatgcagcacgtgctgcgttgtgactttgaggcc
tgtcgtcagtacctggtgaacctggagcaggctgtactcctggagcagagtccccacgtc
ctccactcctttctgggccaccgctgcgacggcaaccgcaacatcctccacgcctgcgtc
tccgtctgcttccccgtcagcaacaaggagaccaaggaggaggaagaagctgaacggtct
gagaggaatacatttgcagagagactgtcagcagtggaggccatcgccaacgctatctct
gtggtgtctagcaacagctctgggaacaggaccggctcttccagcagcagagggctgcgt
ctgagggagatgatgaggcgctctctgagagcagcggggcttggccgtcacgagtccggc
ccctcctccagcgaccaccaggaccccgtttccccacccatcgcccctcccagctgggtg
cccgacccccctcccatggacccagacggtgacatagacttcatcctggcccctgcagtg
ggatctctcaccacagcctcaacagggaccagccagggccccagcacatccactatacca
ggcccctcctctgagccttcggtggtggagtctaaagaccgcaaggccaacgcccacctc
atcctcaaactgatgtgtgacagcatggttctcaggccacacctccgcgagctgctctct
gccaaggatgcccgtggaatgaccccgttcatgctggcagtcagcgggagagcttaccca
gctgcccttactgttctggaggctgcgcagaaaatggccaaggtgggagaacccggcatg
actgagaaggtggatgcagactctttgttcatggagatgatttgtccctcggggaccaac
cctgacgactctcctctctacgtcctctgctgcaacgacacctgcagcttcacctggaca
ggagctgaacacatcaaccaggatatctttgagtgccggacctgcggcctgttggagtct
ctctgctgctgcactgagtgcgccagggtgtgtcacaaaggacacgactgcaaactcaag
aggacctctcccactgcgtactgtgactgctgggagaagtgtaagtgtaagacgctgatt
gctggacagaaagctgctcgcctggacctgctatacagactactcaccaccactaacctg
gtcaccagtccaaacagccggggggagcatatccttctgttcctggtgcagactgttgct
aggcagagtgtggagcactgccagtaccgaccccctcgcatcagagaggacaggaaccgc
aaggctgccaatgctgaagactctgacatgccagaccatgacctggaacctccacgcttc
gcccagctggccctggagagggtgctgcaggactggaatgctctcaagtccatgataatg
ttcggatcccaggagaataaagacccgctgagtgccagcagccgtatcgcccatctcctt
ccagaggagcaggtgtacctgaaccagcagagtggcaccatccgcctggactgcttcaca
cactgcctcattgtcaagtgtgcccctgacattacagtaagtcggtttattgacaccctg
ctggggaccttggtgaaggagctgcagaacaagtacactcctggccggagagaggaggcc
atcgtcgtcaccaggaggttcctgcgctccgtggccagggtgtttgtcatcctcagcgtc
gagatggcctcgtccaaaaagaaaaataacttcatcccccagcccattgggaagtgcagg
cgtgtgttccaggccctgctgccctatgcggtggaggagctgtgcaacgtggcggagtct
ctcatcgtgcctgtgaggatgggcatcgcccggcccaccgcccccttcaccctggccagc
accagcatcgacgccgtgcagggcagcgaggaactcttctctgtggaacccttgccaccg
agaccctccccagaccagtccagcaattctagtcagactgcatcgtcctacatcatcagg
aacccacagcctcgccgcagcagccagtcccagccggtcagagggagagacgaggagcag
gatgacattgtgtctgctgatgttgaagaggtggaggttgtcgagggcgttgctggggag
gaggatcaccatgaagaccaggaggaacagggagaacagggagaggagaacgctgaggca
gagggacagcatgatgaacatgatgaggatggaagcgacatggagttggatctgctggct
gccgcagagaccgagagtgacagcgagagtaaccatagcaaccaggacaatgccagcggg
cggaggagtgttgtcaccgcagcaactgctggctccgaagcaggtgccagcagtgtccct
gccttcttttcagaggacgactcccagtccaacgactcaagcgactcggacagcagcagc
agccagagcgacgacgtggaccaggagaccttcctattggacgagcccttggagaggacc
accactgcctcgcacgtcaacagcgctgcccaggcgccgcgctccatgcagtgggctgta
cgcaacacccccagccagagagccacaggcagcgccccctccagctcctccacccccgct
gcagcgagctccacaggtctgatctacatcgacccgtccaacctgcggcgcagcagtgcc
atcagcaccagcgcggccgctgcggccgcagctctggaggcctccaactcatccagctac
ctgacgtcagcctccagtttagcccgggcctacagcatcgtcatcagacagatctctgac
ctgatgagcctcattcctaagtacaaccacctggtctactcccagtaccctgctgcagtc
aaactcacctaccaggacgctgtcaacctgcagaactttgttgaggagaagctgatccct
acgtggaactggatggtgtccatcatggactctacagaggctcagctgcgttacggctcg
gccctgtcctcagctggcgaccccggacacccatcccaccccctccacgcctcgcagcac
tctgcccgcagggagcgcatgactgcccgcgaggaagccagcctccgcaccttggaggga
cggaggtctgggcgtgcggccactctgctgacagtgcgtcaggggatgatgtcagcgcgg
ggagacttcctgaactacgccctgtctctgatgcgttcccataatgatgagcactctgac
gttctgcctgtgctggatgtgtgttctctcaaacacgtggcctacgtcttccaggccctc
atctactggatcaaagccatgaaccagcagacaactctggacacgacacagatggaccgc
aagaggagccgtgagattctggaactgggactggacaatgaagattctgaacatgagaat
gacgaggacaccaatcaaagttgttttctggtattggaaggcagacaagccagaagaaag
gcagttaggcagaaacgaggcaaaaagaagagggcagctcccaaaggttccacgctccag
gataaggaggatgacccggtccccgctgagacgggacagaaccacccgttcttccgccgc
tctgactccatgaccttcctgggctgtatcccccccaaccccttcgaggtccccctggcg
gaggccatccccctggcagaccagcctcacctcctgcagcccaatgcaaggaaggaggat
ctgtttggccgtcctagtcagggcctgtactcgtcctcatacacagcaagcaaaggcctg
gccgaggccaccctggaccgcagctgcctggaggttaacatgggctcctctcagatccta
cccaccaagatgtcctactcagccaacctgaagaacgtgatgagtatggaaactagtcag
cgcggcagagaggaccagcccatggaccaggagctagtggctccaaagccaggcccctca
ccccacgacctagctgcccagctgaagagcagcctcctggctgaaataggcctcactgag
agcgatggacccccgctcccttcctttagaccccactgtagtttcatggggatggtgatc
tcccatgacatgctgctgggccgctggcgtctgtctctggagctgttcggacgcgtcttc
atggaggacgttggagcagagcctggatcgatcctgaccgagctggggggctttgaggtg
aaggagtctaagttccgccgggagatggagaaactccgtaacctccagtctcgtgacctg
gccctggaggtggaccgtgaccgtgaccagctgatccagcagaccatgaggcagctcaac
acccactttggccggcgctgcaccaccacacccatggctgtgcaccgcgtcaaggtcacc
ttcaaggacgagccgggcgagggtagtggcgtggcccgtagcttctacacggccatcgcc
ctggccttcctgtccaatgacaagctgcccaacctggactgtgtgcagagcgtcagcaag
ggcatgcaggccagcagtacgtgtcatcacgattacaactcaagtatgacattgaatctg
atgcagcggctgaggaacagagaccgggagagggagcggaggagtggagggctccgagcc
ggctctaggagagaccgagacagggactcgaggagacagctgtccattgacacccgaccc
ttcaggccagcctcggaggggaaccccagtgacgaacctgaccccctacctgcccacaga
caggccctgggagagaggctgtacccccgcgtccacgctatgcagccggcgtttgccagt
aagatcacagggatgctgctggagctctctccagcccagctgctgttgctcctggccagt
gaggactctctcagggccagggtggaggaggccatggagctgctcattgcacatggaagg
gaaaatggcgctgacagcatactggacctgggtctcctagaggctcctgagaaagcacag
cagcaggagaaccgtaagcgtcatggctccacccgtagtgtggtggacatggagctggac
gaccctgaagacggagatgacaacgctcccctgttctaccagcctgggaagagaggcttc
tactctccccggcccggcaagaacacggaggccaggctcaactgcttcaggaacatcggc
agaatactagggctgtgtctgctgcagaatgagctctgtccaattaccttgaacagacat
gtcatcaaggtgctgctcggcagaaaggtgaattggcatgactttgccttttttgacccg
gtaatgtacgagagcctgcgacagttgatccgtcactctcaggctggagaggcggaggct
gtgtttgcagccatggacctggccttcgccatagacctgtgtaaggaggaaggggctgga
caggtggagctgctgtcaggtggggtcaacatgcctgtgactcctctcaacgtttacgaa
tacgtgagaaagtacgccgaacacaggatgctggtggttgctgagcaacctcttcatgcg
atgaggaagggtctgttggatgtccttcctaagaacgccctggaggacttgacagctgag
gacttcaggctgctggtcaacggctgtggagaggtcaacgtgcagatgctcatcagcttc
acttccttcaatgatgaatctggtacaaagaccttggcccgtattcacaaagaatctcag
agggaaaatgctgataaattgttgcagttcaaacgctggttttggtccatcgtggagaag
atgagcatgactgagaggcaagatctggtgtacttctggacctccagtccgtctctgcca
gccagtgaggaaggcttccagcccatgccctccatcaccatcaggcctccggacgaccag
cacctgcccacggccaacacctgcatctcgcgcctctacgttccactctactcctccaaa
cagattctaaaacagaaactcttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
