Salmo salar (Atlantic salmon): 106579149
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Entry
106579149 CDS
T04363
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03266
Virion - Herpesvirus
sasa04081
Hormone signaling
sasa04145
Phagosome
sasa04148
Efferocytosis
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
106579149
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
106579149
04512 ECM-receptor interaction
106579149
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106579149
04148 Efferocytosis
106579149
09144 Cellular community - eukaryotes
04510 Focal adhesion
106579149
09142 Cell motility
04820 Cytoskeleton in muscle cells
106579149
04810 Regulation of actin cytoskeleton
106579149
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106579149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106579149
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106579149
04515 Cell adhesion molecules [BR:
sasa04515
]
106579149
04090 CD molecules [BR:
sasa04090
]
106579149
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106579149
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106579149
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106579149
CD molecules [BR:
sasa04090
]
Proteins
106579149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
106579149
NCBI-ProteinID:
XP_014014225
UniProt:
A0A1S3NGG3
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All DBs
Position
ssa19:complement(56376216..56416203)
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AA seq
805 aa
AA seq
DB search
MGRPTHITQRITLWIGYFVLFAVTDVLGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLMAGCAPPTALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAKEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVSRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSPVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTITFECECKCQARAEPLSPVCN
NGNGTYECGICLCHPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGTILVLGLVGLLIWKLLVTIHDRREFAKFEEERARAKW
DMGHNPLYKGATSTFTNITYRGNKE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggcctactcacataacgcaaaggattacactttggataggttatttcgtttta
tttgcagttactgatgttttgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacttgtgcgtggtgttcccaagaggactttgggcag
ggggtggcaggctcgtctcgttgtgacctgaagcgtaacctattgatggcgggctgtgct
cccccgaccgcccttgagttccccaccagcaagctgcaggtgaaagaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaagac
tacccggtggacctgtattacctgatggacctgtctttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccaaggaaatgggtcgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcgccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaggtaagccgcttcactgaggaggtgaagaaa
caaatcgtgtccaggaacagagatgcccccgagggaggcttcgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatggacgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtcctgtggtgcccctctaccagaactacagtgagctgattcctgggaccact
gtgggcaccctgtccaacgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctatcc
ttcaacgccacctgtctcaatggagaggtcatccctggcatcaaatcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgtcccaaggac
aagcgcaagacgtttgtcatcaagcctgtgggcttcaaggactctctgaccgtcactatc
accttcgagtgtgagtgcaagtgccaggcccgcgccgagccactcagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtcacccggggagactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggagaggc
gactgcgtctgtgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgctacaagggcgagctgtgttcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgtggggcctgcgagtgcacccagccgggagcctatggggccacctgcgac
aagtgccccacctgccccgatgcctgcacaatgaagaaagagtgtgtggaatgtaagcat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctagtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcctgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccgggaccatcttggttctgggtctggtcggcctgctcatctggaagctgctggtc
accattcatgaccgccgtgagttcgccaagttcgaggaggagcgtgctcgcgccaagtgg
gatatgggccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggagtga
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