KEGG   Salmo salar (Atlantic salmon): 106579149
Entry
106579149         CDS       T04363                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03266  Virion - Herpesvirus
sasa04081  Hormone signaling
sasa04145  Phagosome
sasa04148  Efferocytosis
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04810  Regulation of actin cytoskeleton
sasa04820  Cytoskeleton in muscle cells
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    106579149
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    106579149
   04512 ECM-receptor interaction
    106579149
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106579149
   04148 Efferocytosis
    106579149
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106579149
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106579149
   04810 Regulation of actin cytoskeleton
    106579149
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106579149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106579149
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106579149
   04515 Cell adhesion molecules [BR:sasa04515]
    106579149
   04090 CD molecules [BR:sasa04090]
    106579149
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    106579149
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106579149
Cell adhesion molecules [BR:sasa04515]
 Integrins
  Integrin beta subunits
   106579149
CD molecules [BR:sasa04090]
 Proteins
  106579149
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 EGF_integrin EGF_TEN EGF_Teneurin BNR_6
Other DBs
NCBI-GeneID: 106579149
NCBI-ProteinID: XP_014014225
UniProt: A0A1S3NGG3
LinkDB
Position
ssa19:complement(56376216..56416203)
AA seq 805 aa
MGRPTHITQRITLWIGYFVLFAVTDVLGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLMAGCAPPTALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAKEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVSRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSPVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTITFECECKCQARAEPLSPVCN
NGNGTYECGICLCHPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGTILVLGLVGLLIWKLLVTIHDRREFAKFEEERARAKW
DMGHNPLYKGATSTFTNITYRGNKE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgggtaggcctactcacataacgcaaaggattacactttggataggttatttcgtttta
tttgcagttactgatgttttgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacttgtgcgtggtgttcccaagaggactttgggcag
ggggtggcaggctcgtctcgttgtgacctgaagcgtaacctattgatggcgggctgtgct
cccccgaccgcccttgagttccccaccagcaagctgcaggtgaaagaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaagac
tacccggtggacctgtattacctgatggacctgtctttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccaaggaaatgggtcgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcgccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaggtaagccgcttcactgaggaggtgaagaaa
caaatcgtgtccaggaacagagatgcccccgagggaggcttcgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatggacgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtcctgtggtgcccctctaccagaactacagtgagctgattcctgggaccact
gtgggcaccctgtccaacgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctatcc
ttcaacgccacctgtctcaatggagaggtcatccctggcatcaaatcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgtcccaaggac
aagcgcaagacgtttgtcatcaagcctgtgggcttcaaggactctctgaccgtcactatc
accttcgagtgtgagtgcaagtgccaggcccgcgccgagccactcagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtcacccggggagactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggagaggc
gactgcgtctgtgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgctacaagggcgagctgtgttcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgtggggcctgcgagtgcacccagccgggagcctatggggccacctgcgac
aagtgccccacctgccccgatgcctgcacaatgaagaaagagtgtgtggaatgtaagcat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctagtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcctgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccgggaccatcttggttctgggtctggtcggcctgctcatctggaagctgctggtc
accattcatgaccgccgtgagttcgccaagttcgaggaggagcgtgctcgcgccaagtgg
gatatgggccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggagtga

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