Salmo salar (Atlantic salmon): 106579180
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Entry
106579180 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106579180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106579180
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
NGL family
106579180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
106579180
NCBI-ProteinID:
XP_014014314
UniProt:
A0A1S3NGQ1
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Position
ssa19:55158319..55188357
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AA seq
752 aa
AA seq
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MRVVMVTSPSTPSPLLWLVQLLLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPQATRAPEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEIGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGVSTLSN
KNNPSPLNQQGQDIPISCTQVPISSAAFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
cttttactgtggctccaccaccatggacctcaggtaacagaggccgcgcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtcatctgtacaaggaagagtttggtg
gaagtaccggatagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgatcaagtctgacacgttcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatccgacaaatcgaggtgggcgcgttcaatggcctgcccaacctcaacacc
ctggagctcttcgacaaccgcctcacgctggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggccgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgtggt
ctgaaggaaatccccaacctcacacccttggtccgactggaggagctagagctgtctggg
aaccagctggggaatgtccggcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggaactcaacctgtcccacaacaccttgcactcgctgccccatgatctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgtgat
gtcctgtggcttagctggtggctgaaggagacggttcccagtaacaccacatgctgtgcc
cgctgccatgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcccgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgccgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtaccgcgtcaggatctcagtccttcacgat
ggaaccctgaatttcaccaatgtgactgtgcaggacacaggccaatacacctgcatggtg
accaactctgccggcaacactacggcaaccgcagtgctcaacgtgtccacctctgactcc
agcaaccctttcagctatttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattccgctgcaaggcagtacatcaacgaaacctatgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggatttaccatatctccatct
cgctcatctctctcctccctgtccccgcaagccaccagagctcctgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggacgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaatgtggaggatgagattggtgccggggccgggagcggcatctcagggggttcg
accatgcaatccgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggtctgagcattggaacaggggcaggcgtcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcagccgctttccagaccatgtccggaaatggcgccaacaccaaccct
ctttctgtttccccacctctgccgatgtccctccccatgtcccctatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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