KEGG   Salmo salar (Atlantic salmon): 106579219
Entry
106579219         CDS       T04363                                 
Symbol
wdr24
Name
(RefSeq) WD repeat domain 24
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    106579219 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106579219 (wdr24)
Membrane trafficking [BR:sasa04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    106579219 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_HPS5 zf-RING_16 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 106579219
NCBI-ProteinID: XP_014014389
UniProt: A0A1S3NG06
LinkDB
Position
ssa19:complement(53264426..53271095)
AA seq 785 aa
MEKMSRVTTALGSSAISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKWHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLI
SGDSNRKPYPGGDRRYPIFFFKKPDLTEQFAHVSSALSVFESSLESRRMDWFVKTARLYL
LGGKPFAELCDHNAKVAKELNRPQVSTTWTMLRLMFSDPANLSTPGPNNISKLGNLPLMN
SFSMKEMGTESRLDRSKGESRQDNIHLEPGNSLINSNNDENEETEGSEGQAEYMFGDAEL
DDDDLYSMEHEIQAVEEQEYTLPQEAFPLRHEIMDNPSVPEHLQQDKADSPHASGNEAEV
MCLTPIESLSLIAISQPLFSPHLPARFFCPVVREMLSHYAEQGDVQMAVSVLIVLGDRIR
KEINDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHVNCSNCKRP
MSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMNWLKSNSHCPAGCGH
LCEYT
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggagaagatgtcgcgggtaaccacagccctgggcagcagtgccataagcggacgcacc
atgttctgccacctggacgcgcccgccaacgccatcagcgtgtgccgcgatgccacacag
gtggtggtggccggccgcaatatcttcaagatctacggcctggaggaggagcagtttgtg
gagaagctcaacctgcgcgtgggccgcaagccctcgctcaacttcagctgcgccgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaacggggcggtagtc
acctggaacctgggcaagccgtcgcgcaacaagcaggaccagctgttcaccgagcacaag
cgcacggtcaacaaggtgtgcttccaccccacggaagtctacatgctgctcagtggctcc
caggacggctacatgaagtgcttcgacctgcgcaagaaggagtccgtcagcaccttctca
ggtcagtcggagagtgtaagagatgttcagttcagcatgaaggattactttacttttgct
gcttcctttgagaacggtaacgtccagctgtgggacatccggaggcctgaccggtatgag
aggatgttcacagcccacaccggccctgtgttctgctgtgactggcaccccgatgacagg
ggttggctggccactggcggccgggacaagatggtgaaggtgtgggacatgaccaccaac
cgggccaaagagatctactgcgtccagaccattgcctcggtggcacgggtcaagtggcgt
cctgagaggaagtggcacctggccacctgctccatgatggtggaccacaacatctatgtg
tgggacgtccgacggcccttcatcccctttgccaccttcgaggagcacaaggacgtgacc
acgggcatcgtgtggcgccaccagcatgacccctacttcctgctgtcaggctccaaggac
agcacgctctaccagcacatgttcaaggacgccagccggcccgtggatcgggccaacccc
gaggggctgtgcttcggcctgtttggcgacctggccttcgccgccaaggagagcctcatc
agtggcgactccaacaggaaaccctacccgggtggcgaccgccgctacccaatcttcttc
ttcaagaagcccgatctgacggagcagtttgcccacgtgtccagcgccctcagcgtgttc
gagtcgtctctggagagcaggcgcatggactggtttgtcaagacggcgcgcctctacctc
ctcggcggcaaacccttcgctgagctgtgcgaccacaatgccaaggtggccaaggagctc
aacagacctcaggtttctactacatggacgatgcttcggctcatgttctcagatccagcg
aacctctcgacacctggtccaaataacatcagcaaactgggcaaccttcctttaatgaac
agtttcagtatgaaggagatggggacggagagcaggctggaccgtagtaaaggagagagc
agacaggacaacattcacctggagcctgggaactcgctcatcaacagcaacaacgatgag
aatgaggagaccgaggggagtgagggacaggcggagtacatgtttggtgacgctgagctg
gatgacgatgacctctactctatggagcacgaaatccaggccgtggaagaacaggagtac
acgctcccccaggaggccttcccgctgcgccacgagatcatggacaacccgtcggtcccg
gagcacctgcagcaggacaaggccgactcgccgcacgccagcggcaacgaggcggaggtc
atgtgcctgacgcccatagagtccctctcactgatcgccatctcgcagccgctgttcagc
ccccaccttcccgcccgcttcttctgccccgtggtcagggagatgctgagccactacgcc
gagcagggcgacgtgcagatggcggtctcggtgctcatcgtcctgggagaccgcatccgt
aaggagatcaacgacctcactcaggagcactggtacatgtcctacattgacttgctgcag
cgtttcgagctgtggaacgtgtccaacgaggtcatcaagctgagcacttgcagcgccatc
acctgtctgaaccagacatccaccactctgcatgtcaattgcagcaactgcaaacggccc
atgagcaacaggggctggatctgtgaccggtgccaccagtgtgccagtgtttgtgccgtg
tgccaccatgtggtgaaggggctgtttgtgtggtgccagggctgcagtcatggcgggcac
ctggagcacgtgatgaactggttaaagagcaattctcactgcccggccggctgcggacac
ctgtgtgagtacacctga

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