Salmo salar (Atlantic salmon): 106579308
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Entry
106579308 CDS
T04363
Symbol
Ndp52a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2-like
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106579308 (Ndp52a)
04137 Mitophagy - animal
106579308 (Ndp52a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106579308 (Ndp52a)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106579308 (Ndp52a)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Xenophagy
Cargo receptors
106579308 (Ndp52a)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106579308 (Ndp52a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
CCDC39
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
106579308
NCBI-ProteinID:
XP_014014592
UniProt:
A0A1S3NGR6
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All DBs
Position
ssa19:50956941..50965996
Genome browser
AA seq
646 aa
AA seq
DB search
MESVESAANMELSTTFSQVVFQEIPHSYTPNTAVTCCYTLTAAIQQNPRDWVGIFKVGWS
TTKDYYTFVWIEPSLDLIKQDANRKQVLFSAYYLPKDEAEFYQFCYIDSNGQVRGASTPF
CFKTSGEQSTDGSLENDLLVITTQEKVEQREREKDEMVMELGQLKEQNEILRGVLKEQQQ
EIDCLKLSNDELYKADRNLEKQQQKSREHEQLTQKAKSMEDSHKAQEEQVVKSERVIEEL
VMELGQLKEQNETLTRALKEQHQEVDRLKESKEELAQVVSKLEQQQQNAREHEELTQNAK
SMDESHTGQESLTPICEKYEQALSKIKQLKKEREELKGKVEVQSVEIAQLSPRLRDSEQE
SYRLKDHIQLLQVDLQSSEKEKEKLSVELRKLRGLTHDLDDLKTENKALHRSLSEQGHQP
QQEMADSDLKVQYQALLGQLQEARTQLQKELQASNNIRRRAEQLEGELVKVNECTNLIAM
RSTQAEQKSCKLEMQLLEFHRVIEEKESMAEIAKVEKEELFRENQDLKRNVERLRKEFAD
IQAAPVSMQHPNPYGSSTDPTPTEEQQQDTLAAFLHFGNPYETPGPATNVDVLSLTCRHC
HECFPGITPNELELHEESHRVCPFCTLICDGMEQTKYEEHVYSHEL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtcgaaagtgcagccaacatggaattgtcaacaaccttttcccaggttgta
tttcaggaaatcccccactcctacacgccaaatactgccgtgacttgctgctacactctg
acagcagccattcaacagaaccccagagactgggtggggatatttaaggtgggctggagc
accacaaaggattattacacatttgtgtggatagaaccatcattggatctgataaaacag
gatgcaaacagaaaacaagtgctttttagtgcatactacttgccaaaagatgaggcagag
ttctatcagttctgctatattgatagcaacggccaagtgagaggagccagcaccccattc
tgctttaaaacctcaggggaacaaagcacagacggcagcctggaaaacgacctcttggtc
atcacaacacaggaaaaggtagagcaacgtgagagggagaaagacgagatggtcatggag
ttggggcaactgaaagagcaaaatgagattttgagaggagtcctgaaggagcaacagcaa
gagattgattgcctcaagttgtctaacgacgaactatacaaggcagacaggaacctggag
aagcagcagcagaagtcaagagagcatgaacaactgacacagaaagctaaatcaatggaa
gactcacacaaagcacaggaggaacaggtggtgaaaagtgagagggtgatagaagagctg
gtcatggagttggggcaactgaaagagcaaaatgagactctgacacgtgccctaaaggag
caacatcaagaggttgaccgcctcaaggaatccaaagaggaacttgcacaggtagtgagc
aaactggagcaacagcaacagaatgctagagagcatgaagaactgacacagaatgccaaa
tcaatggatgaatcacacacgggacaggagtctctgactcctatttgtgagaaatatgaa
caagcattgagcaagatcaaacagctgaagaaggagcgagaggagttgaaaggaaaggtt
gaggttcaaagtgtggagattgcacagctgagcccaaggctcagagattctgagcaggag
tcttacagactgaaggatcacattcagcttctacaggtggatctccagagcagtgagaaa
gagaaggagaagctttctgtggagctgcgcaaactgcgtggtctcacacatgacctggat
gacttgaagactgagaacaaggccttacacagaagcctgtcagagcaggggcaccagcca
cagcaggagatggcggacagtgatttgaaggtgcaataccaagctcttcttggccagctg
caggaggctcggacacagttgcaaaaggagctgcaggcttccaacaacatacgcagacgt
gcagagcaattagagggggaactggtgaaggtcaatgagtgcacgaatctcatagccatg
aggtctacacaggcggagcagaaaagctgcaaactagagatgcaacttttagagttccac
agagtcattgaggagaaagaaagcatggcagagatcgctaaagtagagaaagaggagttg
ttcagagaaaatcaggatctcaaaagaaatgttgagagacttcgcaaggagtttgctgac
atccaggctgctccagtgtccatgcagcatcccaacccttatggctcttcaactgacccc
acccccactgaggagcagcagcaagatacactggctgcctttctccactttgggaaccct
tatgagaccccaggccctgcgacaaacgtggacgtgttgtccttgacatgtcgtcactgc
catgagtgcttccctggcatcaccccgaatgagctggagctgcatgaggagagccacaga
gtgtgccccttttgcaccctcatctgtgacggaatggagcagaccaagtatgaagaacac
gtctacagccatgagttgtag
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integrated database retrieval system
