Salmo salar (Atlantic salmon): 106579504
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Entry
106579504 CDS
T04363
Symbol
pdx1
Name
(RefSeq) pancreatic and duodenal homeobox 1
KO
K07594
insulin promoter factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106579504 (pdx1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
106579504 (pdx1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
rva_4
Motif
Other DBs
NCBI-GeneID:
106579504
NCBI-ProteinID:
XP_014014926
UniProt:
A0A1S3NIB4
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Position
ssa19:complement(67435530..67440413)
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AA seq
276 aa
AA seq
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MNREEHYYSPSQLFKDPCPYQRPHSEDFSHSPPPCLYMGRQAQSVYSSPSIGGLDQASLP
DIAPYSMPMREDPGVQQLHHPQAPQQTLQPGAYGDQGELALCADRNRYHLPFPWMKSTKS
HVQTWKGQWAGHYMEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTE
RHIKIWFQNRRMKWKKEEDKKRVRGVDPEQDSSITSGDLKDEAGLGVGGAGLGVGGAGLG
VEVAVAGTPTPAPLTTTTTPPSPLHSHSLSGSRDSA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagaagagcactactattccccctcgcagctgttcaaagacccctgcccctac
cagagaccccacagcgaggacttcagccacagccctccgccctgcctctacatgggccgg
caggctcagtccgtctattcctcgccttccatcggagggctagaccaggcaagtctccct
gatattgctccgtacagtatgcccatgcgagaggacccaggtgtgcagcagctccaccac
ccccaggcgccccagcagactctccaaccgggggcttacggagaccagggggagctggct
ctgtgtgcggataggaacagataccacctgcctttcccctggatgaaaagcaccaagtct
cacgtacaaacctggaagggacagtgggcaggccactacatggaggcagaggagaacaag
cggaccaggacggcctacacgcgagcccagctcctggagctggagaaggagttcctgttc
aacaagtacatcagcaggccgcggcgtgtcgagctggccctcaccctcagcctcacagag
agacacatcaagatctggttccagaaccgacggatgaagtggaagaaggaggaggacaag
aagagagtgaggggggtcgaccccgagcaggactcgtccattacgtcaggggacctgaag
gatgaggctgggctgggggttgggggggctgggctgggggttgggggggctgggctgggg
gtggaggtcgcggtggcagggactcccacaccggcacctctcaccactaccaccacaccc
ccctcacccctacactcccactccctgtcaggttctagagactcggcctag
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