Salmo salar (Atlantic salmon): 106579688
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Entry
106579688 CDS
T04363
Name
(RefSeq) zinc finger CCHC domain-containing protein 2-like
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
106579688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
Vts1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
106579688
NCBI-ProteinID:
XP_014015294
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All DBs
Position
ssa19:77085101..77154809
Genome browser
AA seq
1108 aa
AA seq
DB search
MLNKTKLPVRTAETGDDTAEEQPDLHIPTSVSPTISDRLEDSSRHTGYPSQLDKETVFEW
FGLHLNPAKRIELMCGLLHMCQPLELRFLGSCLEDLARKDYQILRDVEMRANCPNDLGIL
SDVIDPVVRSKLLVCLSLLRSDSKDCAGILFRILNHMDLALFYKNYPGYTVSSFRDPFHP
SCVDGKTFRRTEHICGRPKEAAVGPLEQLALLFTMASLHPAFPFHQKETLLVQLDKIKVA
TEDNRQQNQYRINAQAQKAEYLGPAAVTTEASLHERTQGQRQCASQTPPSCRTQQGSRTQ
REAVHIEKIVLKGMSQSRTDREYNFEVKWSDSSSNNVRKTQLELEGFLLKLPKEQSTESF
EKGILRLLKQGDKYESRGVERNLKEKFLSAPQAFRQTRKVCGFFLSESSSSSSCSCSRCN
PAALGKPDKEDGSEASSQEEVVYVDPYVQGHRKKHVSNSPCLSVPDAKSSQGKSIRRGSH
SSKHNSLPDWRRKTCTSQPDQEASGGPGPEQHQDSEKRGNHPASMRQPLGPDREKGKKAY
LANGSMVPPASQRARQSTGKDGHSSQEVYGETSSESYSSASSPQHHQPESLDSEDEKDKD
TDSSQGPAEAFFPWQEVAGGAMPTIHQLVSAKPVGEPPSLDYPPNTFMHPLPCILPNGAL
PADAPLPVMPPPQGAAALVDNKVVGGLIMQVPLVLREPMSTNVPVPVPGDPEQRDGPAAV
PMVLPGFGSLALGLHPPGSPALQPLVQHFKTAPPQTTASSEGVTTLPAHQPLVEAISVIN
PGPPYASTLQPAYPNPDPASPLTPSVPLGDLSIPHTKHPDVALFSGLPSLYTMAPIPTSV
MATLGVAPSPGQDQAVVPPSVPTHTPSPAPGSTQTDSSYVNSTSNSVTKQQAQPQQQQQQ
QTTHQQQAMCCGACGCRGGCGNSRTAPSFFFPHQMAPRQVFGAPPIFQLTSLCTSNYLSQ
PPPQSNGQAQLTFFPPAPYAGQTLLHTHPHSDHVLGAQLGYSLQQMMSPFNRFYPHMYPS
GVGMVPGSGGGGGAPGGAVGVNKNNGNVSCYNCGVSGHYAQDCKQPCVDSTQQGNNATTM
GLFRWTPSAPLQHPPSTRSYSLSHTSAL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcttaataaaacgaagctgcccgtgagaaccgcggagacaggagatgatacggccgag
gaacagccggatctccatattcccacatcggtctctcccacgatctcggacaggctcgaa
gattcatccagacacacaggatatccatctcaattggacaaagagaccgttttcgagtgg
tttggtttgcatctaaatcctgccaagcggatcgagttaatgtgcggactgctacatatg
tgccagcccctcgaactccgttttttgggctcttgtcttgaagacttggcacggaaagat
taccaaatactacgggatgtcgagatgagggcgaactgtccgaatgatttgggtatttta
tctgacgttatcgatccggtcgtgcgctccaaactactggtctgcttgtctcttctgcga
tctgacagcaaggattgtgctggaatactatttcggatattgaaccatatggatctcgcc
ttgttttacaaaaactatcccggttatactgtttcttccttcagggacccgttccatcct
tcgtgtgtggacgggaaaacgttcaggagaaccgaacatatttgcgggcgtccaaaagag
gcagcggtcggacctttggagcagttagctctgcttttcactatggcctcattgcaccca
gcgttcccgtttcatcaaaaagaaacccttctagtgcagctggacaaaatcaaagttgcc
acagaggataatagacagcagaatcagtacagaataaacgcccaggcccagaaagcagag
tacctgggcccagctgccgtcaccactgaagccagtctgcatgagaggacacaggggcag
agacaatgtgccagtcagacaccacccagctgcaggacacagcaaggaagcagaacccag
agggaagctgtacatatagagaagattgtactgaaggggatgtcacagagcaggacagac
agggaatacaattttgaggtgaagtggtctgactcctcatccaacaatgtcaggaaaaca
cagcttgaactggagggcttcttgttgaagctccccaaggagcagtccacagagtcgttt
gagaagggcatcctccggctgctcaaacagggagacaagtacgagagcaggggagtggag
aggaacctcaaggagaagtttctgtcggctccacaagctttccgacagacaaggaaggtc
tgtggcttcttcctgtctgagtcctcctcttcctcctcctgcagctgcagcagatgtaac
cctgcagccctggggaagcccgacaaggaggacggttcagaggcatccagccaagaggaa
gttgtgtatgtggatccgtacgttcagggacaccggaagaaacatgtcagcaatagcccc
tgccttagcgttcccgatgccaaaagttcccagggcaagagcattcggaggggttcacac
agctcgaagcacaacagcctgcctgactggaggaggaagacctgcacgagtcaacccgac
caggaggcctctggggggccaggcccagagcagcatcaggacagtgagaagaggggcaac
caccctgccagcatgaggcagccactgggaccagacagggaaaaggggaagaaagcatac
ttggcaaatgggagcatggtgccaccagcttctcagcgagcgcgacagtcgacagggaaa
gacggacactccagtcaggaggtatatggggaaacctcgtctgagagctacagctcagcc
tccagcccccagcaccaccaaccagagagcctggacagcgaggacgagaaggataaagat
acagacagtagccagggcccagcagaggccttcttcccctggcaggaggttgcaggtggt
gccatgcccaccatccaccagctggtctctgccaagcctgtcggggagccccccagcctt
gactatcccccaaacaccttcatgcaccccctgccctgcatattgcccaacggggcacta
cctgccgatgcccctctgccagtcatgccccccccccagggggcagctgccttggtagac
aacaaggtagtcggagggctgatcatgcaggtgcccctggtcctccgagagcccatgtcc
accaatgtgccagttcccgtgccaggggatccagagcagagggatggccctgctgcagtg
cccatggtactcccagggtttggctccctagctctgggcttacacccccctggcagccct
gccctgcagcccctggtccaacacttcaagacagcccctccacagaccactgccagctct
gagggtgtcaccaccctccctgcccaccagcccctggtggaagctatcagtgttatcaac
cccggtccgccctatgcctcaactctgcagcctgcctaccccaacccagaccctgcctcc
cccctaaccccctccgtacccctgggggaccttagcatccctcacaccaagcacccagat
gtggctcttttttcaggcctgccctccctgtacactatggcccccatccccacttccgtc
atggccacgctaggggtagcgccttcccctggacaggatcaggcggtggtgcccccgtcc
gtacccacccacacccccagcccagcgcccggctcaacccagaccgactcctcctacgtc
aacagcaccagtaactccgtcaccaagcaacaggcgcaaccacagcaacagcagcagcag
cagacgactcaccagcaacaggccatgtgctgcggggcgtgcggttgccgaggcggctgc
ggcaacagccgtacagcgccatcgtttttcttcccccaccagatggcgccacggcaggtg
tttggtgcgccgcccatcttccagctcacgtccctgtgcaccagcaactacctcagccag
ccgcccccgcaaagcaacggccaggcccagctgacattcttcccccccgccccttacgct
ggccagaccctgctgcacacccaccctcactctgaccatgtactgggcgcccagctaggc
tacagcctccaacagatgatgtcgcccttcaaccgtttctacccgcacatgtacccctcc
ggcgtgggtatggtgcccggttcgggaggcggcggaggggccccggggggagcggtcggc
gtcaataagaacaacggcaacgtctcctgctacaactgtggggtcagtgggcactacgcg
caggactgcaaacagccctgcgttgattcaacacagcaaggtaataacgccacgaccatg
gggctcttcagatggaccccttcggcccctctgcagcaccccccctcaacccgctcttac
tctctatcacataccagtgctttataa
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