Salmo salar (Atlantic salmon): 106579791
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Entry
106579791 CDS
T04363
Symbol
cldn1
Name
(RefSeq) claudin 1
KO
K06087
claudin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa04382
Cornified envelope formation
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106579791 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106579791 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106579791 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106579791 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106579791 (cldn1)
04147 Exosome [BR:
sasa04147
]
106579791 (cldn1)
04515 Cell adhesion molecules [BR:
sasa04515
]
106579791 (cldn1)
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106579791 (cldn1)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
106579791 (cldn1)
Exosomal proteins of colorectal cancer cells
106579791 (cldn1)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
L1 family
106579791 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
106579791
NCBI-ProteinID:
XP_014015448
UniProt:
A0A1S3NJ28
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All DBs
Position
ssa20:889218..904237
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AA seq
224 aa
AA seq
DB search
MLLAFQVLGLSLGVIGWCLENSCTSSHSWRAHSHSQAVTTNNWQLEGLWMTCAATSLGSV
QCQRYKTVLGLPGYIQACRALMIIALLLGLASIIVSVLGLKCTKIGSTSEQVKVKITLTG
GSLFILSGLSTLTAVLWYTARVVQEFHDPFFAGVRFELGTGLYVGWGAACLAILGGVMLC
CSCKRGPSAPPTGGLSYNYSKTSRGQQIYRAAPVSESGSSKAYV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagccttccaggtcctgggtctgtctttaggggtgataggctggtgtctggag
aacagctgcactagttcccattcctggagggcccacagccactctcaggctgtcacaacc
aacaactggcagttggagggcctgtggatgacctgcgcagccacgtctctgggctctgtg
cagtgccagagatacaagactgtactggggctaccaggttatatacaggcatgtcgagcc
ctgatgatcatcgctctgctcctgggtctagcgtccatcattgtgtcagtgctggggctg
aaatgcacaaagatcggcagcacttctgaacaggtcaaggtcaaaatcactctgaccggc
ggcagcttgttcatcttatcaggtctttccaccttgactgctgtgttatggtacactgca
cgggtggtgcaggaattccatgatccattttttgcaggagtaaggtttgagctgggtaca
ggtctatacgtgggctggggagctgcctgtctggccattctaggtggggtcatgctctgc
tgttcctgtaagagaggtccatcagcaccaccaacagggggattatcatacaactactca
aaaacaagccgtggacaacagatctacagggcagcacctgtgtcagagtccgggagttca
aaagcttatgtttaa
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integrated database retrieval system