Salmo salar (Atlantic salmon): 106579792 Help Entry 106579792         CDS       T04363                                  Symbol atg16l1 Name (RefSeq) autophagy related 16 like 1   KO K17890   autophagy-related protein 16-1 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04136   Autophagy - other sasa04140   Autophagy - animal sasa04621   NOD-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:sasa00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     106579792 (atg16l1)    04136 Autophagy - other     106579792 (atg16l1)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     106579792 (atg16l1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sasa04131]     106579792 (atg16l1)    03029 Mitochondrial biogenesis [BR:sasa03029]     106579792 (atg16l1) Membrane trafficking [BR:sasa04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     106579792 (atg16l1)  Others   Specific organelles associated proteins    Auto phagosome     106579792 (atg16l1) Mitochondrial biogenesis [BR:sasa03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     106579792 (atg16l1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st ATG16 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_NWD2_C eIF2A Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_ACSF4 DUF4200 Tricorn_2nd ADIP Beta-prop_SPT8 Beta-prop_HPS5 CCDC22_CC Beta-prop_DCAF12 NET2A CCDC93_CC STX6_10_61_N CC_Bre1 PUMA_CC DUF7310 FKBP15 Lipoprotein_6 Motif Other DBs NCBI-GeneID:  106579792 NCBI-ProteinID:  XP_014015451 UniProt:  A0A1S3NJS3 LinkDB All DBs Position ssa20:922211..984547 Genome browser AA seq 621 aa AA seqDB search MAERRVECSWKRHVGEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQAVLSERYQSDKYDF QNRHDGSPGADSSRSDNLQQEMAQMRIRHQEELTELHKKRGELAQSVIELNHQIQQKDKE IRRNEAKMEEYQRQIAELEGECRELRGQLQDLEQANQTLKDEYDALQITFGALEEKLRRT TDDNQELVSRWMAEKSQEANKLNAENEKDCKRRQAKLQKELADAAKEPLPMDPDDDIEVL AEDSGKGTREASPNRPLSRTPSKRISGQPPQSGLLDSISNIFGVSESVQPGLLPPDSRRR PGNSYGTSLENTETTSGVCADVRVPSTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRV KLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTG HSGKVLAARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGH FDKKVRFWDIRAESIVRELELLGRVTSLDLNHDRTELLTCSRDDLVKIIDLRSNAIRQTF SAQGFKCGADWTRVTFSPDGSYVAGGSADGALYVWNVLTGKLERTLDKNHCSAINSVSWS PSGAYVVSVEKGSKAVLWSDM NT seq 1866 nt NT seq  +upstreamnt  +downstreamnt atggcagaacgtcgtgtggagtgctcatggaagaggcacgtcggagagcagctgaagcag agggaccgtgtgcagaggcaggccttcgaggagatcatccaccaatataaccgtctcttg gagaagtccgatctacaggctgttctttcagagagataccagtcggacaaatatgacttt cagaacagacatgatggcagcccgggggcggactcgagtcgcagcgacaacctacagcag gagatggcccagatgcgaatcaggcaccaggaggagctgacagagcttcataagaaacgg ggcgagctggcccagagtgtgattgagctgaaccaccagattcagcagaaggacaaggag attcggcgcaatgaggccaagatggaggagtaccagcggcagattgccgagctggaggga gagtgccgggagttgcgtggtcagctgcaggacctggagcaggccaaccagacgctgaag gatgagtacgacgccctgcagatcaccttcggtgccctggaggagaagctgcggcgcacc actgatgacaaccaggagttggtgtcgcgctggatggctgagaaatcccaagaggccaac aagctcaatgcggaaaacgagaaagactgcaagcgcaggcaagccaagcttcagaaggag cttgcagacgctgcaaaggagcccctgcccatggacccggatgacgacatcgaggttcta gctgaggattctgggaaaggcactagagaggcctctcctaaccggccgctcagccgcacc cccagtaaacgtatctccggacagcctcctcaaagcggtctgttggactcaatctccaac atatttggcgtatctgagtctgtgcagcccggactccttcctccagactccaggcgtcgt cctgggaactcgtacggaacatcactcgaaaacacggaaacgacctccggagtgtgtgcc gatgttcgcgttccctccactgccctccatgtatttgaagcccatgatggggaagtgaat gcggtgcggttcagcccaggctcccgactcctggccaccggagggatggaccgcagggtc aaactgtgggaggtggtctcaggtcgctgtgagccgaagggtgctctgactggcagcaac gccgggatcaccagtatagagtttgacagtgctggctcctacttgctggctgcatccaat gactttgccagtaggatctggactgtggatgactacagactgaggcacacgctgacaggc cacagcggcaaggtcctggcggctcgctttctcctggacaacgctcgtatcgtctccggg agctacgacaggactctgaaactgtgggacctgcgcagcaaagtctgcatgaagactgtg tttgctgggtccagctgtaatgacatagtctgcacagagcagtgtgtcatgagcggccat tttgataagaaggtgcggttctgggacatcagagcggagagtattgtccgtgagctggag ctcctgggccgagtcacatctcttgacctgaaccacgaccgcaccgagctgctcacctgc tcccgggacgacctggttaagatcatcgacctgcgcagtaacgcgatccgccagaccttc agtgctcagggcttcaagtgtggcgctgactggacccgagttaccttcagtcccgatggc agttacgtggcggggggctctgcagacggcgccttgtatgtgtggaacgtcctgacgggc aagttggagcgcaccctggacaagaaccactgctcggccatcaactctgtgtcctggtca ccatcgggagcctacgtggtcagtgtggagaagggcagcaaggccgtcctctggtctgat atgtga

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