Salmo salar (Atlantic salmon): 106579840
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Entry
106579840 CDS
T04363
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106579840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106579840
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106579840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
106579840
NCBI-ProteinID:
XP_014015580
UniProt:
A0A1S3NJZ3
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All DBs
Position
ssa20:complement(24183807..24199761)
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AA seq
713 aa
AA seq
DB search
MFSNLHSSLAPAKVRRSTSKYPYSSTENLAAIGSSPNGSDKKRRNPLSPSPIVPQSDGNP
NAGFRIGDPVPIKAVESKIPSLPLPDYDSLFPQKRHGVQGQTRWDHIIAEVNQRQQEYVP
RLIGKEMSVDGPDLDSPGPPRNDKYSYLQERAAEHLHQQQTQVQSTSLRSVGPSSLPALT
PPSKPVAAVPLRLVVDSNTNQDQSTIQANPSERPNAFVSKVLVSTRPMVQSRDLPSVTPR
EDAKKVINTSVATASDGKPVFSTEKPRPTSQVVSVSSSTDEPKGLPNTPKEIPAAKPRQR
LVRKEPLRPADHEQTSAGSTTVEQENRLERRASTLDIMRRSSPVTAKNTEVTAYNEKQLL
FDSAESDIDKKTQLEHMKAKFAELDPFPIADILPKDPWAQPEPSHTGNYLFTGEPQKNRK
LKEQAMTTDDLDKLFAPNNPTDPFASFNDGDSDEPREQEKTEHSPAFQRGFSQIKKKQGA
PQPSANSSNKAAIGKIELDKQDPSPREDKLISSAATTGCVKLAPQNTRQSKLYGREGVET
QDKWAADPFTSSSPVPSVLTSPEPPQSVVGEPTSQTGEKTLLRAWVSPSEVQPLTVLSSN
GGGPASTPCRPHPVKPMSSIESQAPISTPVVGEMLTYDRTLGKMKAPGMVESGPYTQLTQ
EELITLVVKQQTELSKKDSKIVELEEYIDNLLVRVIEENPSILLGLNSVKQAL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacctccactcctcccttgctcccgctaaggtgcggaggagcacctccaag
tatccctacagcagcactgagaacctggctgccataggatcttcccccaatggatctgat
aagaagcggcgaaatcctctgtcgcccagcccaatcgtaccgcaaagcgatggaaacccc
aatgcaggcttcagaattggcgatcctgtgccaattaaggcggttgagagcaaaatacct
tctctacctcttcctgactacgatagcctgttcccacagaagagacatggagtacaaggg
cagactcgatgggaccatataattgcagaggtgaatcagagacagcaagaatatgtgcct
cggctcattggtaaagagatgagtgtggatggcccagacctcgactctccaggacctcca
cgtaatgataaatattcctacttgcaggagcgggcagcagagcacttacaccagcaacag
acacaagttcaatctacctctttgaggagcgtagggcccagcagtttgccagcactcact
cccccttccaaaccagtagctgcagtcccccttagactagtggtagactctaacacaaac
caagaccagagcactatacaggctaatccatctgagaggcccaatgcctttgtctccaaa
gtcttggtctctacaagacccatggttcagagcagagacttaccctccgtgacacctcgg
gaggatgcaaagaaggtgataaacacatctgttgctacagccagtgatggcaaacctgtt
ttctcaacagaaaaacctagacctacatcacaagtggtttcggtgtcaagttctacagat
gaacctaaaggactgccaaacactcccaaagagatccccgcagccaaacccagacaaagg
ttagtccgcaaagagccattgagacctgccgatcatgagcagacatcagcagggtctacc
actgtagagcaggagaacagattggagaggagagcctcaaccctcgatatcatgagacgg
agtagtccagtgactgcaaagaacactgaggtgactgcttacaatgaaaagcaactcttg
tttgactctgcagaaagcgacattgataaaaaaacacagttggaacacatgaaagcgaag
tttgctgaacttgaccccttccccattgctgatatcctgcctaaagacccatgggcccaa
ccagagccaagccacactggcaattacttgttcactggagaaccacagaaaaaccgcaag
cttaaagaacaggcaatgacaactgatgacttggataaacttttcgcaccaaacaatcca
acagatccctttgccagttttaatgatggtgactcagatgaacctcgagagcaggaaaaa
acagaacacagtcctgcttttcaaaggggattttcccaaattaaaaagaaacaaggagca
ccccagccttcagctaattcaagtaataaagcagcgattggaaaaattgagctagataaa
caagatccttcacccagagaagacaagctgatcagctcagccgctacaacaggatgtgta
aaactggcacctcaaaatactagacaaagtaaactctatggcagagaaggggtggaaact
caagacaagtgggcagcagacccttttacttcctcctcccctgtaccttctgtcctgact
tctcctgagcccccccagtccgtagtgggagagcccacctcacagaccggggaaaagacc
ctactacgggcctgggtctcaccctctgaggtgcagccactcactgtgctgagtagcaat
ggtggtgggccagcctcaactccatgcaggcctcacccagtgaagcccatgagctccata
gagagccaagctcccattagcaccccggtagttggagagatgttgacttatgaccgcacc
ctggggaagatgaaggcgccaggcatggtggagagtgggccctacacccagctgacccag
gaggagttgattaccctagtggtgaagcagcagacggagctctccaagaaagactcaaag
atcgttgagctggaggagtacatagacaacctgctggtgcgtgtaatcgaggagaatccc
agcatcctgctgggccttaactctgtcaagcaggccctgtaa
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