Salmo salar (Atlantic salmon): 106579887
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Entry
106579887 CDS
T04363
Symbol
CIAO1, ciao1a
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-A
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106579887 (CIAO1)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106579887 (CIAO1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106579887 (CIAO1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
106579887 (CIAO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR55
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_EML
eIF2A
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_ELP1_1st
Beta-prop_SCAP
Beta-prop_HPS5
B-prop_COPA_B_2nd
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
RMC1_N
Motif
Other DBs
NCBI-GeneID:
106579887
NCBI-ProteinID:
XP_014015694
UniProt:
B5X9P2
A0A1S3NJU9
LinkDB
All DBs
Position
ssa20:complement(22451579..22453768)
Genome browser
AA seq
330 aa
AA seq
DB search
MKDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGH
QRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQL
ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE
DDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTL
SGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVN
CIAWHPKEAGLLVSCSDNGEIAVWNYQSEV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacactttggcccttctacagaaattcaacgcgcatccagattctcgctgttgg
tatgttgcatggaaccccaagggcacattgctggcctcgtgtggtggtgaccgggccatt
cgaatatggggaagggaaggtgactcttgggaatgcaagacagtgctccaggatggacac
cagagagctgtcagaaaggtggcatggtccccatgtggaaactacctggcctcagccagc
tttgatgccacaacctgtatctggaagaagaagaatgatgactttgagtgcttgactgtg
ttggaaggacatgagaatgaggtgaaatgtgtggcctgggccccatccggtaaccagctg
gccacatgtagcagagacaagagcgtctggatctgggaagtggatgaggaggatgagtat
gagtgtgtgagcgtagtgaactctcatacacaggatgtcaagcatgttgtctggcaccca
acacaggagctcctggcctcgtgtagctacgacaacaatgtgtgtgtctataaagaagag
gatgatgactgggagtgcagggcgaccttggagggtcacacctccactgtctggggtttg
acctttgacccaagtggccagagactggcctcctgcagtgatgaccgtactgtaaagatc
tggaaagaatgtcagcctggaggtgggcaggacacggcttggaaatgtgtttgcaccctt
tcagggtttcatggacggacagtgtatgatattgcatggtgtccactgaccggtgccctg
gcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacagctgatcca
gaccagcctgttttctccctgtctgcccatgtacccaaggcccacagccaggatgtcaac
tgtatcgcctggcaccccaaggaggctgggctccttgtctcctgcagtgacaatggggag
atagcagtctggaactaccagtctgaggtctga
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integrated database retrieval system
