Salmo salar (Atlantic salmon): 106579922
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Entry
106579922 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106579922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106579922
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106579922
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106579922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf_RING_Vps8
PHD_NSD
zf-RING_16
zf-UDP
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
106579922
NCBI-ProteinID:
XP_014015797
UniProt:
A0A1S3NKS5
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All DBs
Position
ssa20:complement(19992777..20049463)
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AA seq
653 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDTQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGAGSNNIQHNNISAGSGQAKAEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKNPEDVVRRYTEKVKVAPDEDCTICMERLVMSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agcgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatacccaactggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggtttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaacgctatcctggcc
tctcagcgccgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctc
aatgtggtacggcagagtaacactttcgccggaaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagct
gaacaggtgcagtcacctctgtctagttccaacttcccttgttccccggcactgccgtcc
cttccgctcgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgactggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgctgctggcctgccc
gtgtgtctgacccgggcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaacccagaggatgtggtgcggagatacacggagaaagtgaaggtagcccct
gatgaggactgcaccatctgcatggagaggctggtgatgtcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcccggctacctggaagccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgcaagaggcttcccacggcactgctacctcccagacaatgacaagggcaggaaggtc
ctgaaactcctgatcatggcctgggaccgccgcctcatcttcaccatcgacacgtccagc
accacgggagagtcagacacggtggtgtggaacgagatccaccacaagacagagtttggc
tccaacctgacagggcacggctacccagaccccaactacctggacaacgtcctgacagag
ctgtcagcccagggggtcgtagaggacaacctgaaggactga
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