Salmo salar (Atlantic salmon): 106579940
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Entry
106579940 CDS
T04363
Symbol
msi1
Name
(RefSeq) musashi RNA binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106579940 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106579940 (msi1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106579940 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106579940
NCBI-ProteinID:
XP_014015830
UniProt:
A0A1S3NKP3
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Position
ssa20:complement(19485383..19512592)
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AA seq
392 aa
AA seq
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MDTEGSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVLAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEMHFHEINSKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQTATYTSRSYTGITPGYTYQFPEFHLERTPLLTSPHPPELTERSTLFVARAGFETCCTS
STLSAIPLSAYGPMAVAAAAVARGSAPSRSGGFSSPGPMADLYAAANQESAVSSYLSAAS
PSPNTGFGHSLGVRHSPYHGPLIATAFTNGYH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagggagccagagcagcctgtcctccacggactcccctcacgacccctgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaggagtgcatggtgatgcgggatccagttaccaagcgctct
aggggttttggatttgtcacgtttgttgaccaggccggtgtggattcagttttggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcattccctcgtagagcc
cagcccaagctagtgactcggaccaagaagatctttgttggaggtctttccgtgaacacg
accattgaggatgtcaaggcgtatttcgagcagttcggaaaggttgatgatgccatgctc
atgttcgacaagaccaccaacagacacagagggtttggctttgtcacgtttgagaatgag
gatgtggtggagaaagtgtgtgagatgcacttccatgagataaacagcaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccacgggctcggccagggggcgctct
cgggtgatgccctacggcatggatgccttcatgctgggcatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
tttcagacagctacgtatactagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggacccctcttctgacatcaccacacccccctgag
ctcacagagaggtcaacgctgtttgtagcccgagctggatttgaaacctgctgtacctcc
tctaccctgtcagccattcctctgtcggcatacggaccaatggcagtggcggcagcagca
gtagcaagaggctccgccccctctcgctcgggggggttcagcagccctgggccaatggca
gacttatatgcagcagccaatcaggagtctgctgtcagcagttacctcagcgctgcaagc
ccctccccaaacactgggttcggccatagtctgggggtaagacacagcccttaccacggc
cctctgattgctacggccttcactaacggctaccactga
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