KEGG   Salmo salar (Atlantic salmon): 106579940
Entry
106579940         CDS       T04363                                 
Symbol
msi1
Name
(RefSeq) musashi RNA binding protein 1
  KO
K14411  RNA-binding protein Musashi
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106579940 (msi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106579940 (msi1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106579940 (msi1)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 NID PHM7_cyt Nup35_RRM_2
Other DBs
NCBI-GeneID: 106579940
NCBI-ProteinID: XP_014015830
UniProt: A0A1S3NKP3
LinkDB
Position
ssa20:complement(19485383..19512592)
AA seq 392 aa
MDTEGSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVLAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEMHFHEINSKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQTATYTSRSYTGITPGYTYQFPEFHLERTPLLTSPHPPELTERSTLFVARAGFETCCTS
STLSAIPLSAYGPMAVAAAAVARGSAPSRSGGFSSPGPMADLYAAANQESAVSSYLSAAS
PSPNTGFGHSLGVRHSPYHGPLIATAFTNGYH
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggatacggaagggagccagagcagcctgtcctccacggactcccctcacgacccctgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaggagtgcatggtgatgcgggatccagttaccaagcgctct
aggggttttggatttgtcacgtttgttgaccaggccggtgtggattcagttttggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcattccctcgtagagcc
cagcccaagctagtgactcggaccaagaagatctttgttggaggtctttccgtgaacacg
accattgaggatgtcaaggcgtatttcgagcagttcggaaaggttgatgatgccatgctc
atgttcgacaagaccaccaacagacacagagggtttggctttgtcacgtttgagaatgag
gatgtggtggagaaagtgtgtgagatgcacttccatgagataaacagcaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccacgggctcggccagggggcgctct
cgggtgatgccctacggcatggatgccttcatgctgggcatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
tttcagacagctacgtatactagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggacccctcttctgacatcaccacacccccctgag
ctcacagagaggtcaacgctgtttgtagcccgagctggatttgaaacctgctgtacctcc
tctaccctgtcagccattcctctgtcggcatacggaccaatggcagtggcggcagcagca
gtagcaagaggctccgccccctctcgctcgggggggttcagcagccctgggccaatggca
gacttatatgcagcagccaatcaggagtctgctgtcagcagttacctcagcgctgcaagc
ccctccccaaacactgggttcggccatagtctgggggtaagacacagcccttaccacggc
cctctgattgctacggccttcactaacggctaccactga

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