Salmo salar (Atlantic salmon): 106579952
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Entry
106579952 CDS
T04363
Symbol
cux2
Name
(RefSeq) cut like homeobox 2
KO
K09313
homeobox protein cut-like
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106579952 (cux2)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
106579952 (cux2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
106579952
NCBI-ProteinID:
XP_014015872
UniProt:
A0A1S3NKD4
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Position
ssa20:18991435..19112066
Genome browser
AA seq
1563 aa
AA seq
DB search
MAADVGSMFQYWKKFNLRRLQRELNSIASELAGRQEESEHSHKHLVELSREFKRNVPEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPVPVLEATHTLEERLQQLQ
SSAPDSEALVRELSGHWKRHLECLDKPGDTGEDPAAAESGPGEASSWTAGVMTPNSKQTL
RVTGSPQQNHQGQNQTEGETEDTDATLADRLGEAEERIKVLHSSLSTAQTDLLDLRCKYD
QEKANKAEEVGVIMMNLEKANQKAEMAQREVERLKEQLASPRSATPGSCHPPEGTSGERG
DVSPSKLEAKLMAKDREILRLLENVQRLQFALQEVQNISANQIIELESQLAYKTEAIERL
EAKLQSQLDYEEIKTELRILKVMKLASTNGNSSQDTAEAFLRDKEAFLPSPKYLMDKARI
LHNNDEDRSEESGRESGREWGRPSGSFSSVSQVDERTSASPGPPTMDVSSSSHDLPRPFS
VSPCSRDRLSADHVVHKQLLSSPLFKKESGSPLMAFPTALYAAKATLMSANQGPAGAGGI
EAGLPSDQSESGSSTAGDDDQLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEI
LARPKPWRKLTVKGKEPFIKMKQFLSDDQNILALRTIQVRQRGSITPRIRTPETGSDDAI
KNILEQAKKEIQSQRGGGSGTGYALYSTVLGDIKSSLGSPSGLSSNGAGGSSDDTIKNIL
EQARREMQAQQQALMEMDVCGRASSTSAGPQVERLGLPEPYKVLPLPTFIKQEEGGTVTV
CMANPISSPQTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGGG
SSRPFTSVSPSLSSSSSSGPSALPRPWPRLENGECLPNSEEASAAEEDTGSGMVRSVEVK
VESDVSVSGESPGPGRGLSYYPSYLPRTLKPTVPPLTPEQYEMYMYREVDTIELTRQVKE
KLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQAL
TQLPSQSLSQDKSPVTAQSSPSPPPSPEESHPSPLVEPVSLTLESSKENQQPDGLGLMPP
HPEGGKSTPSLLSLHQPHTPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGESI
LGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRR
YGLLSTGSDSDSPSARSECVSPALASIDLCPYSQVKKPRVVLGAEEKEALRKAYLLEPYP
SQHTIEMLACQLNLKTNTVINWFHNYSRSRMRREVLMEGLQDNDTDTEHHSYSPSAIQSP
ISDGDERRRLHPAGRTPHPIRPLSANTPLPHVKQEASELEDEGEEEERNGYIKQPKIQCF
SMGVQFPQLKTEHEDQMGGCRELHLAPHYPQSLGQEEGKSSQAQGLFQGALSLDGPQRTS
QSRHEVDDSSKSPVDPVSFKASSEPCRSSLEVSLNSPSAASSPGLMMSVSPVSSSSAPIS
PSLPNPPTTSTNHGLDPNPMPPIQSPKPNRSVQRRTEKIANLNNIIHRLERAANREETLE
WEF
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttaatctacggcggctt
cagagggagctaaactcaatagcgtctgagctggcggggcgacaggaagagagcgagcac
tcccacaagcacctggtggagctgagccgggagttcaagagaaatgttccggaggaagtg
cgggagatggtggctcctgtcctcaagagtttccaagctcaggtggtcgctctgaacaag
cgcagtaaggaggcagagtcggcattcctgggaatctacaagcagcttatcgaagcccct
gacccagttcccgtgcttgaggctacacacaccctggaggagaggctgcagcagctgcag
agttcggccccagacagcgaggccctggtcagggagctcagcgggcactggaagagacac
ctggagtgccttgacaagccaggtgacacaggggaggacccagcagcagcagagtcagga
cctggggaggcatcgagctggacagctggtgtgatgactccaaacagcaaacagaccctc
agagtcacaggctcacctcagcagaaccaccagggccagaaccagacagaaggggaaacc
gaagacacagatgccactctggccgacagactgggtgaggccgaggagaggatcaaagtg
ctgcattcatctctgagcacagcccagacagatcttctggacctgcggtgtaaatacgac
caggagaaggccaacaaggcggaggaggtcggtgtgatcatgatgaaccttgagaaggca
aaccagaaagcagaaatggcccagagggaggtggagaggctaaaggaacagctggccagt
ccccggagtgccacaccagggagctgccatccaccagagggcactagtggggagaggggt
gatgtgtcgccatccaagctggaggctaagctgatggctaaagaccgagagatcctcagg
ctactggagaacgtacagagactacagttcgcactacaggaagtccaaaacatctcagcc
aatcagatcatagagctggaaagccagctggcctataagacagaagctattgagagatta
gaagctaaactgcaatcccagttggactatgaagagattaaaacggaactccgtatcttg
aaggtaatgaagttggcctcaacgaatggtaactcgtcccaggacactgcagaggctttt
ttgcgggacaaagaggcctttcttccctctcccaagtacctgatggataaggccagaatc
ttacacaacaatgatgaggaccgatcggaggagtcaggcagggagtcaggcagggagtgg
ggcaggccctcagggtccttctcctctgtctcccaggtggatgagcgtacctctgccagc
cctggtccccccacaatggacgtctcctcctctagccacgacctcccccgccccttctct
gtgtccccctgctcaagggacaggctgtctgcggaccacgtcgtccacaagcagctcctc
tcctccccactcttcaagaaggaatccggcagccccctcatggccttccccaccgccctg
tatgcagccaaagccaccctaatgtcagccaatcagggacctgcaggggccggcggcatc
gaggccggcctgcccagtgaccaatcggagagcgggagctccactgcgggtgatgacgac
cagttggagacagcagagattgccttccaggtcaaagagcagctgctgaagcacaacatt
ggccagcgtgtgtttggtcactacgtgctgggcctatcacagggctcggtcagtgagatc
ctggcccggcccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatcaag
atgaaacagttcctgtctgacgatcagaacatcctggccctcaggaccatccaggtccga
cagagagggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgccatc
aaaaatatcttggagcaggccaagaaggagatccagtcccagagaggaggtgggtctgga
acaggttatgctctttattcaactgtgctaggtgacattaaatcgtccctgggcagcccc
tccggcttgagcagtaatggggcgggcggcagctcagacgacaccatcaaaaacatcctg
gagcaggccaggagggagatgcaggcacagcagcaggccctgatggagatggatgtctgt
ggcagggcctcgtccacgagcgctgggccccaggtggagcgcctggggctccctgagcct
tacaaggtcctgcctttacccaccttcatcaaacaggaggaggggggcacggtgaccgtg
tgcatggccaaccccatcagcagcccccaaacccccctcagtgtcctctcccctgccgcc
tttgtccagaacatcatccgtaaagtcaagtcggagattggtgaggcggggacttacttc
gaccagcactggtccgtggagcgggggcccataggcatggtgggcggcgtagggggcggc
agctctcggccctttacctcagtgtctccctccctgtcctcctcctcgtcctcgggcccc
tcggccctgccccggccctggccccggctggagaacggagagtgtctgcccaacagtgag
gaggcgtccgcagccgaggaggacactggctcggggatggtacggtctgtggaggtgaag
gtggagtcagacgtgtcagtgagtggggagtcacccggccctggccgtggcctgtcctat
tacccatcatacctcccccgcaccctgaagcccaccgtgccaccgctgacgccggagcag
tatgagatgtacatgtaccgtgaggtggacaccatcgaactcacccggcaggtcaaagag
aagctggccaagaacggcatctgtcagaggatctttggtgaaaaggtgctgggtctgtct
cagggcagtgtgagtgacatgctgtctcggcccaaaccctggagcaagctgacccagaaa
ggcagggaacccttcatccgcatgcagctgtggctgctggaccagctgggccaagcactc
acccagcttcccagccaaagcctctctcaagataaaagcccagtgacggcccagtcgtcg
ccctcccctccccccagcccagaggagagccaccccagcccattggtggagcccgtcagc
cttaccctggagagcagcaaggagaaccagcagcctgatggcctgggcctgatgcccccc
cacccagaaggagggaaatccacccccagcctgctgtccctccaccagccccacaccccc
ctgggcatccaggaactggtggcaatgtccccagagctggacacatatgccatcaccaag
aaggtcaaggaggtgctaacagacaacaacctaggccagcggctgtttggggagagtata
ctgggcctcacccagggctcagtatcagacctgctctctaggcccaagccctggcacaaa
ctcagcctcaaaggcagggagcctttcgtccgcatgcaactgtggctcaacgacccgcac
aacgtggacaagctgagggacatgaagaagatggagaagaaagcctacctgaagaggcgg
tatgggctgctgagtaccggctcagacagtgactctcccagtgcccgctctgagtgtgtg
agcccagctctggcctcaatagacctgtgtccctacagtcaggtgaaaaagcccagggtg
gtgctgggggctgaggagaaggaggctctgaggaaggcctacctcctggagccatacccc
tcccagcacaccattgagatgctggcctgccagctcaacctcaaaaccaataccgtcatc
aactggttccacaactacagcaggtccaggatgcgacgggaggtcctcatggagggtctc
caggacaacgacacggacacagaacaccacagctactctccctcggccatacagagcccc
atctcagacggggatgagaggaggcggctgcaccccgctggacgcaccccccaccccatc
cgccccctcagcgctaacacaccactgccacatgtcaaacaggaggccagtgagctggag
gacgagggagaggaagaggagaggaacggctacatcaaacagcctaagatccagtgtttc
tctatgggtgtccagttccctcagttgaaaacagagcatgaggaccagatgggtggctgc
cgagagctccacctggctccacactatcctcagagcctggggcaggaagagggtaagagc
agccaggctcaggggctcttccagggggcgctctccctagatggcccccagagaaccagc
cagtccaggcacgaggttgatgactccagcaagtctcctgtggacccggtcagcttcaag
gcctcgtctgagccctgccgcagcagcctggaggtctccctcaactccccctccgctgcc
tcctcgcccggcctcatgatgtccgtctcccctgtctcatcttcctctgcacccatctcc
ccatccctgcccaacccacccacgacaagcaccaaccacggcctggaccctaaccccatg
cctcccatccagagccccaagcccaacaggagcgttcagagacgcaccgagaaaattgcc
aacctcaacaacatcatccacaggctggagagagcggctaaccgggaggagaccctggag
tgggagttttag
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integrated database retrieval system