Salmo salar (Atlantic salmon): 106579993
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Entry
106579993 CDS
T04363
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106579993
04020 Calcium signaling pathway
106579993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106579993
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106579993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
106579993
NCBI-ProteinID:
XP_014015969
UniProt:
A0A1S3NKM1
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All DBs
Position
ssa20:complement(17367426..17507733)
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AA seq
2431 aa
AA seq
DB search
MARFEEELSNRRGGVCQAGPPRGAGRPAGPPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSVFIFSEDCIIRKYAKKITEWPPFEYLILATIIANCIVLALEQHLPAGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQAAEFPCGMEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGVWYKRKHNNPVLKR
AKKSKNDLINAEEGEDHFTDISSVVPPGSPFARASLKSSKNGSASYFRRKEKRLRFTIRH
LVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLTEMSMKMYGLG
PMSYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFDEETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEVAITKKMALQKAKEVKEVSPMSAANISITALHSILYTGQHGAERAMPASFV
KQSQGALSSSSSVCSVNSLSYVCSPVHHYLSKEQQKSLKMMSVWEQRTTQLRRHNLRASS
EALYSELDPEERLRMSSALHIRPDMKTHLDRPLVVESHDGPGPMGQHKPRTPEETDTPED
PAGPQPRRHHRHRDRERPIDEANENGDPGKEGRHHVHHSRSKDPDGTRGKEGKSERSRSR
EGGRRHHHQTLVDEGGGGGTGEREHRHHHSHRQAREGNGTVNSGGKGERRSRHKDGRSGE
RCSRGENGANGERRRHKTHGSRGQSTLEGEDHSEREKGRGHRDRYVESEGDSLAISPQQD
PGDQRWGTEGPEDSDNQRNVRRTGQTAVNIPPVTITPPPGETTLIPMNSIDCETMPMNEE
KKTLEERTQSGPRPILPYSSMFVFGQANVVRRLCHYIVSLRYFEMCILVVISMSSIALAA
EDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSG
ALVAFAFSSFMGPPQGVPRGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNS
LKNVFNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGNFLDYDKDEVAAQP
RVWKKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHSVDATFEDQGPSPGYRIEISIFYVV
YFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENVQ
SFQYRMWKFVVSPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKHFNIVFTALFSLEC
ILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTEINTTDRLLNLSFLRLFRAARLIKL
LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAITHHNNF
RTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERSGNLGKECGSDFAYFYFVSFIFLCS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIRYNDMYNLLRII
SPPLGLGKNCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLSSGMVAQRLS
DAELKKELSTVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLKEQQQ
QQQQQNAAGSQGKVGALFKPILPLTYNMEPPCELLPQPQPQALPRPSPTLLNNMEPPCEL
LPQPQPQALPRPSPTLLNNGGTLPGHDGIMKGSSTWVSEKSREVHRPRNNRPVQRGQSED
VPDTTLPQESVEMRKMDTSDSTVPGPGSGLESQGRAVSMPRLNAELQRSQSRHSPGTLLA
PVPDCSPMKRSASTHAPQRPQEVNLRDYTLETPSIQERPHHHHHHRCHHRRERDKKQRSL
DRTPSTAGTPGDPAAEPSSRDRVQDRGRSHERKHHSTAGEKQRYYSCDRYGSREHCHTTK
SATASCATSPSEVQDPSINKQGSGSVKCSPVMMTSGASTPSRGRRQLPQTPLTPRPGVAY
KTANSSPVHFVSAQCGSGLPTLSPGRLSRGLSEHNALLHSGSSHIPSPVTRISSEPFLGY
SHREAQGQGSLYCSLRDELLSPYAARARSPRTALPQMGPGPLHLPPAPQQSRAVPNGYHF
TFGGIGNASPGSGSGARAPRYYHEADEDEWC
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattcgaagaggaactatccaaccggcgtggaggggtctgtcaagcgggccca
ccaaggggggcaggtcggccagcaggccccccaagcggccctagggtgtacaaacaatca
atggcccaaagagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtctgtcttcatctttagtgaggattgtatcatacggaaatatgcc
aaaaagattacagaatggcctccatttgaatacctgatcctggccaccattatagccaac
tgcatcgtccttgccttggagcagcacctaccagccggcgacaagacccccatgtcagag
cgcttggacgacacagagccctattttattggaatattttgttttgaagctggcattaag
atcatcgcccttggctttgcgtttcacaaaggctcctatcttcgaaatggctggaatgta
atggactttgtggtggtgctaacagggatgctggctacagtgggagcagactttgacttg
agaactctgcgggcggtaagggtcctgaggccactgaaactggtgtctggaatccctagt
cttcaggtggttctgaagtccatcatgaaagccatggtgcctctgctgcagatcggtatg
ctgctcttctttgctatcctcatgttcgccatcatcggcctggacttttacatgggcaag
ttccaccggacctgcttcaggactgatacaggtgagcaggcagcagagttcccctgtggt
atggaggctccagcgaggacctgtgagaatggcactgtgtgtcaggaatactggatcggc
cccaactacggcatcaccaacttcgacaacatcctctttgctattctcaccgtcttccag
tgcatcaccatggagggatgggtggacatcctctataacgccaacgatgcctcaggcaac
acctggaactggctctacttcatccccctcatcatcatcggatccttcttcatgctcaac
ctggtcctgggagtcctgtctggggagtttgccaaggagcgtgagcgtgtggaaaagagg
caggagtttctgaagcttcgcaggcagcagcagatcgagagggagctgactggatacctg
gagtggatatgcaaggcagaggaagtgatgctggcggaggaggacaaacacgctgaagag
aagtcccctctggatggagtgtggtacaaaaggaaacataacaacccagtgttgaagaga
gcaaagaagagcaagaatgacctgatcaatgctgaggagggcgaggaccacttcactgac
atctcatctgttgttcctccagggtctccgttcgcccgggccagcctgaagagcagcaag
aacggcagtgcctcttacttccggaggaaagagaagcggctccgcttcaccatcagacac
ctggtcaaggctcagagcttctactggacagtgctgtgtctggtcggcctcaacacactc
tgtgtggccatcgtccattacgaccagcctgagtggctcacatatgcactgtatttggca
gagtttgtattcctgggcttgtttctgactgagatgtccatgaaaatgtatggactagga
cccatgagctacttccattcctctttcaactgttttgattttggagtgattataggcagt
atttttgaggtgatctgggcagttgtgaaacctggggcctcctttggcatcagcgtcctg
agagctctccgtctgctcaggattttcaaagtcactaagtactggaactctctgaggaac
ctggtggtctctctactcaactccatgaagtccatcatcagcctgctgttcctcctcttc
ctcttcatcgtggtgttcgccctactgggcatgcagctctttgggggactgtttaatttt
gacgaggagacgccaacaacaaactttgacacctttccagcagccattctcacagttttc
cagattctgacaggagaggactggaatgcagtgatgtatcatgggatagagtcccagggg
ggcgtgcgccggggaatgttctcctccatctacttcatcgttctcaccctgtttggaaac
tacactctcctcaatgtcttcttggccatcgctgttgacaaccttgcaaacgcacaggag
ctcactaaggatgaggaagagcaggaggtggccatcaccaagaagatggccctccagaag
gccaaggaggtcaaggaggtcagccccatgtcggccgcaaacatctccatcacagcgcta
cacagcatcctgtacacaggccaacatggagcggagagggcaatgccagcaagttttgta
aagcaaagtcaaggtgcactctctagcagctcgtccgtctgcagcgttaattcactgagt
tatgtctgctccccagtccatcactacttgagtaaggagcagcagaagtctctgaagatg
atgtcagtgtgggagcagcgaaccactcagctgaggagacataacttgcgtgccagcagt
gaggccctgtacagcgagctggaccctgaggagaggcttcgtatgtcctccgccctgcac
atccgccctgacatgaagacccacctggaccggcccctggtggtggaatcccatgacggc
cccggccctatgggccaacacaagccccggactcctgaggagacagatacccctgaggac
ccggccggcccccagccacgcaggcaccaccgccaccgggacagggagagacccatcgat
gaggccaatgagaatggcgatccaggcaaagagggtaggcaccatgtccaccacagtcgt
agcaaggacccagacggcacccggggcaaggaggggaagagtgagcggtcgcgcagccga
gaggggggcaggaggcaccaccaccagaccttagtggacgagggaggaggaggggggacg
ggggagagagagcaccgccaccaccactcccacagacaggccagagagggcaacggcact
gtcaacagcggaggcaagggcgagcgcaggtcacgccacaaagatggccgctcgggagag
aggtgctccaggggagagaacggagccaatggggagaggaggagacacaagacccacggc
tcaaggggccagtccacactggagggagaggaccacagtgagagggagaaggggaggggc
cacagggacagatatgtggagtctgagggcgactccctggccatcagcccccagcaggac
cctggagatcagaggtggggcacagagggacctgaagactcagacaaccagaggaacgtc
agacggactggacagacggccgtcaacatcccccctgtcaccatcacccccccacccggg
gagaccacccttatacccatgaacagtatagactgtgagaccatgcctatgaacgaggag
aagaagaccctggaggagcggactcagagtggacccagacccatcctgccttacagctcc
atgtttgtgtttggccaggccaacgtggtgcggcgtctgtgtcattatattgtcagcctg
cggtactttgagatgtgtatcctggtagtgatatccatgagtagcattgcattggctgca
gaggaccctgtccaggccaacgcgccgcgcaacaatgtgctcaagtatctggactacgtc
ttcacgggagttttcacatttgagatggtgattaagatggttgacctgggcctcctgctc
catcctggttcttacttcagagacctctggaacattctggacttcattgtggtcagtggc
gcactggtggcatttgcattttcgagcttcatgggaccgccgcaaggtgtgcccagaggg
tccaaaggaaaggacatcagcaccatcaagtctctcagagttctgagagtcttacggccc
ctcaagaccatcaaacgcctacccaagctgaaggctgtgtttgactgtgtggtcaactcc
ctgaagaacgtgttcaacatcctcatagtctacatgctcttcatgttcatcttcgctgtc
atcgccgtgcaattgttcaagggcaagttcttctactgcaccgatgagtccaagggcctg
gagaaagactgcagaggtaatttcctggactatgataaagatgaggtggcagcccagcct
cgggtgtggaagaagtacgagttccactatgacaacgtgctttgggccttcctcactctc
ttcactgtgtccaccggagagggctggcctgatgttctgaagcactctgtggatgctacc
tttgaggaccagggtcccagtccaggctaccgtatagagatctccatcttctatgtggtc
tacttcgtggtcttccccttcttcttcgtcaacatctttgtggctttgatcatcattacc
ttccaggagcagggagacaaggccatgtcagaatgcagcctggagaaaaacgagagagcc
tgcattgactttgccatcaacgccaagccactgacgcgttacatgccagagaacgtgcag
tccttccagtaccggatgtggaagtttgtggtgtcacctccgtttgagtactccattatg
atcatgattgccctgaacaccgtggtgctcatgatgaagttccatggagctccagacttc
tacgaggccatgttgaagcacttcaacatcgtcttcactgccctcttctctctggaatgc
attctgaagatcattgccttcggtccgctgaattacctgaaggatgcctggaacgtgttt
gactttgtgacagtgctgggaagtataactgacattgtggtcacagaaatcaatacaacg
gaccggcttttgaatctgagttttctgaggctgttcagagcagctcgtctcatcaagctg
ctgaggcagggatacaccatccgtatcctgctgtggaccttcgtccagtccttcaaggcc
ctgccctatgtttgccttctgatagcgatgctgttcttcatctatgccatcattggtatg
caggtgtttggaaacattgagctcaacgaggacacagccatcactcaccacaacaacttc
cgcacttttcttcaggccctcatgctgctgttcaggagtgccacaggggaggcgtggcat
gagatcatgctgtcgtgtttgagtcacagagcctgtgatgagaggtcaggcaacctgggg
aaggagtgtggcagcgacttcgcctacttctactttgtctctttcatcttcctctgctct
ttcctgatgctcaatctgtttgtggctgtcatcatggataactttgagtacctgactcga
gactcgtctatactggggcctcatcatctggatgagttcatccgtgtttgggctgagtac
gaccctgctgcctgcggacggattcgctataacgatatgtacaacttgttacgaattatc
tcgccccctcttggcttagggaagaactgccctaatagggtagcgtacaagcggctagtc
aagatgaacatgcccatcgctgatgacaacacagtccactttacctccactctcatggcc
ctgatccgcacggccctggagatcaaactgtcttcagggatggttgcccagcgtctttct
gatgctgaactgaagaaagagctctctacagtttggccaagcctttcacagaagactatg
gatctgttggttacaccacacaaacccaatgagcttactgttgggaaggtgtatgcagcc
ctgatgatctttgactactacaagcagaaccgagccaagaggctcaaggagcagcaacag
cagcaacagcaacagaatgctgccggctcccagggtaaggtgggggctctgtttaaacca
atactgcccctgacttacaacatggagcctccctgtgaactacttcctcagccccagcct
caggccctacctagacccagccccaccctgctcaacaacatggagcctccctgtgaacta
cttcctcagccccagcctcaggccctacctagacccagccccaccctgctcaacaacgga
ggcacactgccaggccatgatggcatcatgaaaggatcgtccacctgggtgtcagagaag
tctagagaggtccacagacccaggaataacagacctgtccaaaggggccagtctgaagat
gtcccagacacaacccttccccaggagtcagtggagatgaggaagatggacaccagtgac
agcacagtgcctggtcctgggtctggactggagagccaggggagggctgtgtccatgccc
cgcctcaacgcagagctgcagaggagccagtcacgccactccccggggaccctgctggcc
cctgttcctgactgcagcccgatgaagcgctctgcgtccacccacgcaccacagcgcccc
caagaggtcaacctgcgtgactacaccctggagacacccagcatccaggaaaggcctcac
caccaccaccaccaccgctgccaccaccgcagagagagggacaagaagcagcggtcactc
gacaggacgccaagcaccgctggtacaccaggagacccggctgcagagccctcgtctaga
gacagggtgcaggaccgcggccgctcccatgagaggaagcaccactcgacggcgggggag
aagcagcggtactactcctgcgatcgctacggcagcagggaacactgccacaccaccaag
tctgccaccgccagctgtgccacctcccccagcgaggtgcaggaccccagcatcaacaag
cagggtagtggttcggttaaatgcagcccagtgatgatgacctcaggggctagcacaccc
agccgtggacgcaggcagctcccccagacccccctgaccccccgccccggggtggcctac
aagactgccaactcctcccctgtgcactttgtgtctgcccagtgtggcagtggcctgccc
accctgagtcctggccggctgagccgcgggctgtctgagcacaacgccctgctgcacagt
ggctcctcccacatcccctcccccgtcacccgcatcagctccgagcccttcctgggctac
agtcacagggaagcccagggccagggcagtctgtactgcagcctccgggacgagctgctg
agcccctatgctgccagagcacgctcccctcggactgcactgcctcagatggggccgggg
cccctccacctgcctccggcaccccagcagagccgtgcggtgcccaacggataccacttc
acctttggtggtattggcaacgccagcccggggtctggctctggtgcccgggcacccagg
tactatcacgaggcagatgaggatgaatggtgctag
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integrated database retrieval system
