Salmo salar (Atlantic salmon): 106580029
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Entry
106580029 CDS
T04363
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106580029
04514 Cell adhesion molecules
106580029
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106580029
09142 Cell motility
04820 Cytoskeleton in muscle cells
106580029
04810 Regulation of actin cytoskeleton
106580029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106580029
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin alpha subunits
106580029
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
106580029
NCBI-ProteinID:
XP_014016065
UniProt:
A0A1S3NLE1
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Position
ssa02:20812411..20876511
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AA seq
1057 aa
AA seq
DB search
MCAHSMCAFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDPTKQRYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDYLKGVRGGVKRVHFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLREEDEFRDKLTP
ISLALNYSLAPPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTE
LVVGDDNLVLLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDS
RLVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSI
SARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQ
VGWPSRFRDEHLLYALEVLTEGPISCRSNTSLNLLGLQTSSVQDTPELLGFLRNRSSPHR
YRRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPY
LLNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVL
AMLTLAMWKCGFFDRARLPAEDVSDREQLTSDQLADA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcccatagcatgtgcgcgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcagggttcaacctgcatgcggagcgcccggcggtgtat
ggaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacgtcccagccaggcatc
atagagggaggagcagtctactactgtccctatcccccaaaccctgaccccaccaagcag
cgctacagctgtacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtacagtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggatttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccac
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctaatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctatatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagcccctcctcctgacgggaacacacacc
ttcggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tatagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattatctgaaaggtgtgaggggcggagtaaagagagttcatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacactgtctacctacgagaggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctcctccttccaacctggacctcccccct
gtcctcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgt
ggggaagacaacgagtgtattccagacctccagctgtctgcaagcatggaccgtacagag
ctggtggtcggggatgacaacctggtcctgttgaccataaacgcggttaacaaaggagag
ggggcatatgagacggagctacacacactcctaccccctgaagctgattacataggagtg
gaacgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactcc
agactggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggt
ttaaggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacag
atccacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatc
tctgccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccg
tttcctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtc
acacacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccag
gtgggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacg
gaaggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagacgtcc
tctgtccaggacactccagaattgttgggctttctgagaaaccgtagctctcctcaccgc
tacagacgagccaccagtgctgcccagccctacagcagcaagaccctgaactgcagtaac
atcatttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgta
gtcaagatccgttcccgactctgggctcacaccttcctccagagacgtaacgacccatac
ctcctcaactccaccgtgtccttcagagtgacggccctgccctaccgcctccagccctcc
tccttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtg
gcgtttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctg
gccatgctaacactggccatgtggaagtgtgggttctttgaccgggcacggctgccagcg
gaagatgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa
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