Salmo salar (Atlantic salmon): 106580063
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Entry
106580063 CDS
T04363
Symbol
thbs3
Name
(RefSeq) thrombospondin 3
KO
K04659
thrombospondin 2/3/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106580063 (thbs3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106580063 (thbs3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106580063 (thbs3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106580063 (thbs3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106580063 (thbs3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106580063 (thbs3)
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106580063 (thbs3)
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Opsonins
106580063 (thbs3)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106580063 (thbs3)
Exosomal proteins of colorectal cancer cells
106580063 (thbs3)
Exosomal proteins of bladder cancer cells
106580063 (thbs3)
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106580063 (thbs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_MSP1_1
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
106580063
NCBI-ProteinID:
XP_014016151
UniProt:
A0A1S3NLR8
LinkDB
All DBs
Position
ssa02:complement(20898577..20911434)
Genome browser
AA seq
955 aa
AA seq
DB search
MGARRDVTTFLALSTFLFVATCEPMDQQDMQVIDMLTLDSKTSVSAVEKVTGAMSVLSDI
YIVSTFRLPPKMGGVLLGLYSKEGNKKYLELAIMGKINKALVRYVREDGKIHTVNLQSTN
LADGRTHSIILRIGGLRRDNLHLELYVNCRLADSSQGLPPLVPLPAEKVEIRNGFKAYAR
LQGAVESLKMALGGSVAKAGTLTDCPFQGDSSVYSTVGATAEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLIRNTILECQVCGFHDPRSRCSPNPCFKGLSCMETFDYPG
YRCGPCPEGMTGNGTHCQDIDECSIAQPCYSPGACINTVKGFSCELCPPGLWGPPLFGVG
LEYANHHKQECADIDECIEVANACVPNSMCTNTIGSFRCGGCKVGYLGNQTVGCVPRRSC
ATLSFNPCDANAHCIIERNGEVSCACNIGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHC
KQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLEPNKDQQNSDTDSFGDA
CDNCPNVPNIDQRDTDSNGQGDACDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDGVGDAC
DSCPEISNPMQTDIDNDLVGDVCDTDQDTDGDGHQDSRDNCPDHPNSSQLDSDNDGLGDD
CDDDDDNDGFPDVQDNCRLITNPNQKDSNSNGVGDVCENDFDNDSVWDLIDVCPESSEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
INTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSTPFRAMAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTNEEVKLLWSDPRNVGWRDKTSYRWQLSHRPQVGYIRVKLYEGTEIVA
DSGVVIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFNPYRKQVLLHIKV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaggcgcgatgtgacaacttttctggctctatccacatttctattcgttgca
acatgtgagccaatggatcagcaagatatgcaagtcattgacatgctaaccctggactcc
aagaccagtgtgtctgcggtggagaaggtgacaggtgccatgagtgtgctcagtgacatc
tacattgtgtccacattccgcctgcctcccaagatgggaggggtgctgctgggcctctac
agcaaagaggggaacaagaagtacctggagctggccatcatgggaaagatcaacaaagct
ctggtgcgttacgtgagggaggatggcaaaattcacacagtgaacctccagagcacaaac
ctggctgatggtcgcacacactccattattctccgaatcggaggcctgcgcagagacaac
ctacacctggagctctacgtcaattgtcgattggctgactccagccagggcctccctcca
ttggtccctctccccgcggagaaggtggagattcgtaatggcttcaaggcctacgcaagg
ctacagggtgctgtggagtccctcaaaatggcgctagggggcagtgtggccaaagcaggt
accctgacagactgtccattccagggggattcatcagtctacagcacagtcggtgcgact
gcagaagtgaactccattctaggagaccacacaaaggctctgattggtcagctgatcatc
tttaaccagatcctaggagagctgcgagaggacatcagagagcaggtgaaggagatgtcc
ctgattaggaacaccattctggagtgccaagtgtgtggcttccacgaccctcgttcccgc
tgctcccccaacccctgttttaagggcctgtcctgcatggagacctttgactacccaggg
taccgctgtggtccctgcccggagggcatgacgggcaacggaacccactgccaagacatt
gatgagtgttccatagcccagccctgctactctccaggtgcgtgtataaacacagtgaag
ggtttcagctgtgagctctgtccccctggtctctggggcccacccctctttggggtcgga
ttggagtacgccaaccaccacaagcaggagtgtgcagacatcgatgagtgtattgaagtt
gccaacgcctgtgtgcccaactccatgtgtaccaacaccatcggctcgttcaggtgtggt
ggctgtaaggtgggttacttggggaaccagacagtgggctgcgtgccccgtaggtcctgt
gccacactcagctttaacccctgtgatgccaacgcccactgcatcatagagaggaacgga
gaggtgtcctgtgcgtgcaacattggctgggccggtaacgggaacacttgtggcacagac
acagacattgatggatacccagaccgctctttaccctgtatggacaatgacaagcattgt
aaacaggacaactgtgtttacacacccaactcaggccaggaggacgcagacaacgacggc
atcggagaccagtgtgacgaggacgcagatggggacggcatcaagaatgtggaggataac
tgtcgactagaacccaacaaagatcagcagaactcagacacagactctttcggtgacgcc
tgtgacaactgtcccaatgtccctaacattgaccagagggatacggacagcaacgggcaa
ggagacgcctgtgacaatgacatagatggagatggtatccccaacgtgctggacaactgc
cccaaagtccccaaccccatgcagacagacagggacggagacggggtaggagacgcctgc
gacagctgccctgagatcagcaaccccatgcagacggacattgacaatgacctggtgggg
gatgtgtgtgacactgaccaggacacggatggggacggtcaccaggactccagggacaac
tgccctgaccatcccaacagctcccagctggactcggacaatgatggccttggggacgac
tgtgacgatgacgatgacaatgacggattcccagacgtacaagacaactgcagacttatc
accaatcccaaccagaaagattctaacagtaacggggtgggcgatgtgtgtgagaacgac
tttgacaacgattcagtctgggatctgattgatgtgtgccctgagagttcagaggtcaca
ctaacagacttcagagcctatcagacagtcattctggatccagagggcgatgcccagatc
gatcccaattgggtggtgctcaatcagggcatggaaatagttcagaccatgaacagtgat
cctggtttagctgtgggctacacggcgttcaacggggtggactttgagggcaccttccac
atcaacacggtgacggacgacgactatgcaggcttcatcttcggctaccaggactcctct
tccttctacgtggtgatgtggaaacagacagagcagacctactggcagtcgacacccttc
agggccatggcccaacctggcctgcagctcaaagcagtgaagtcccgtacagggcctggt
gagtacctgcgtaatgccctgtggcacacaggggacaccaacgaggaggtgaagctgctg
tggtcggacccacggaacgttggctggagagacaagacatcttaccgctggcagctcagc
cacaggccccaggtgggctacatcagagtgaagttatatgaggggacggagattgtggct
gactctggcgtggtgattgacactaccatgagaggcggacgactgggggtcttctgtttc
tcccaagagaacatcatctggtccaacctgcgctaccgctgcaacgacactgttccagac
gacttcaacccatatcgcaaacaggtcctgctgcacatcaaggtgtga
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