Salmo salar (Atlantic salmon): 106580123
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Entry
106580123 CDS
T04363
Symbol
rapgef1
Name
(RefSeq) Rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106580123 (rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
106580123 (rapgef1)
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Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
106580123
NCBI-ProteinID:
XP_014016293
UniProt:
A0A1S3NLK3
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Position
ssa20:12735652..12789702
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AA seq
1228 aa
AA seq
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MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHSIKTAEKPANKGL
SRLEEHEKDVVSALRYFKTIIDKMVVDKKVLEMLPGSASKVLEAILPLVQVEPRIQHSSA
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPPAALTESAAEPPAKEKESLDKSSAATQSTEVLTEPTEEEAEEVAPPK
PPLPGVKMAEHHPPALPPKKRQSAPSPTRVAVVAPMSHATSGSGLPMGTGLHKQEYEVDA
LQRRFSGGSHSYGGESPRLSPCNSMGKLSKSDEQLSWTVDSGQCSRNTSCETLDTTDHYD
PDYDFLHQDLSSLEQMPPLPVGGCLSPLPESHSESSSPSPCPGPGPPMAQPHFTPAYPSP
QPSLQGSSTSPLYSRMTPALPPPALPEKKRRSGASSGFSDGSYSGSSWRVSFERHPSQYD
NLMEEDMPPVPPFPLFTPGVSPMIMCHAGDGFVSEFCASETADVPQSPPPLPEKKSRHIL
KYMQFVEDYSEPQPSLFYQTPQSESIYEQRNKRFQEVYSFNDSYSSNDSVHEPVPPPALP
PKQRQLASHSASPSSSSSSSLSCHLQQSQAAVVEEVGSALSMSVSNSFLSRQASLTTPVH
KTILRSYSQDFAPLCQSSIPYLLSSVSSHSPIVHQSQSMDLAAPGTGSPDPVLVANGSLD
SSGGSLAVCLPTDSSFSDTRQTSLSESANEEVGEGEYVNLYSSSQAKGDGPLSRRDSSAI
DDSLEDTASENPLCKDTCNDSRRQKSSEEGPSSEETDELSLVDHMEIMSRITLKQESDDG
PDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHCRYTRFSHSPDT
FKKRVSKNTFFVLVRVVDELCLVEMTEDILKQLMDLVFRLVCNGELSLARVLRKNILDKV
EQRKLLRYTNSLKPLAARGVAARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAK
EQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKLLLKFIKIMKHLRKLNNFNSY
LAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLIL
QDLTFVHLGNPDLINGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNDDIVSFFNDFSDHL
AEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaagcaagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacgccctcaaagaaagtc
agtaagccacctttagaacatagcatcaagactgcggagaaacctgctaacaagggtctg
agtcggttagaggagcatgagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggtggtggacaagaaggtgctggagatgttaccagggtctgccagtaag
gtcctggaggccatcctgcctttagttcaagtggaaccaaggatccagcacagttcagcg
gtgtcatcttgtcttaaccgtgtgtaccagagcctgggcaatctcattcgctggtccgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgctcgacggtgttaaggagctggtgaaactgaccatagagaaacag
gagcatccctcccctacgtctcctgtcaaaccagtgccacctgccgccctgactgagagc
gctgcagagccacctgccaaagagaaggagagtctggacaagagttcagccgcaacccaa
tctacggaagtcctgactgaacccactgaggaagaagcagaggaggtggcccctccgaaa
ccccctctccctggtgtaaagatggctgaacaccatcctccagctcttcctccaaagaag
cgccagtcggcgccctcccccacccgggtggcagtggtggcccccatgagccacgccacc
agtggctccggtcttcccatgggcaccggcctccacaaacaggagtacgaggtggacgcg
ttgcagcggcgcttctcagggggcagccattcgtacggaggggagtcgccgcgcctgtcg
ccctgcaacagcatgggcaagctgagcaagtcggacgagcagctgtcctggacagtggac
agtggacagtgctcacgcaacaccagctgtgagaccctggacaccacagaccactacgac
ccggactacgacttcctgcaccaggacctgtccagcctggaacagatgcctcccctgccg
gtgggggggtgcctcagccccctgcccgagtcccacagcgagtcctcctctccttccccg
tgccctggccccggcccacccatggcccaaccccacttcacccctgcctacccctccccc
caaccgtccctccagggctcctccacgtcccccctctactcccgcatgactcccgcattg
ccgccccccgccctgccagaaaagaagcgtcgcagcggtgccagctcgggcttctccgac
ggctcctactcgggctcctcctggcgcgtctccttcgagcgtcatccgtcccagtatgac
aacctcatggaggaggacatgccgcctgtgccccccttccccctgttcacgcctggcgtc
tcacccatgatcatgtgccacgccggcgatgggtttgtgtctgagttctgtgccagcgag
acggcagacgtcccccagagtccacccccactccccgagaagaagagccgccacatactg
aagtacatgcagtttgtggaggactactcggagccccagccctcactcttctaccagaca
ccgcagagcgagagcatctacgagcaacgcaacaagcgcttccaggaagtctacagcttc
aacgactcgtatagcagcaatgactctgttcatgagcccgtcccacccccggcactgcca
cccaaacagaggcagctggcctcccactctgcgtctccctcttcctcgtcctcatcctct
ctctcctgccacctccagcagtcgcaggctgcggtggtggaggaggtggggtctgcgctc
agcatgtccgtctctaactccttcctgagccgccaggcctccctgaccacccccgtgcat
aagacaattctccggtcctattctcaggactttgcgcctctctgccagtcttccattcca
tatctcctctcatctgtctcttcccactctcccattgtccaccaatcgcagagcatggac
ctagctgccccgggcactggcagccctgaccctgtgctggtggccaacggctcactggac
agctctggtggctctcttgcagtctgccttcccactgactcttctttctctgacactcgt
caaacctctttgagtgaaagcgctaatgaggaagtcggggagggagagtacgtcaatctg
tactcatccagccaagccaaaggagacgggccgctctcccgccgagactcatccgccata
gatgactcactggaggacactgcctcagagaacccactgtgcaaggacacgtgcaatgac
agccgaaggcaaaagtcctcagaagaagggccgagtagcgaggagacagatgaactttcc
ctcgtcgatcacatggagatcatgtcccggataacactaaagcaggagagcgacgacggt
ccagatgtccgagccggatcgggggatattttattagtccacgccacagaaacagaccgc
aaagatcttgtcttgtactgtgaggctttcctgacgacgtacagaacgtttataaccccc
gaggacctcatcaaaaagctgcactgcagatacaccagatttagtcacagcccagacacc
ttcaagaagagagtcagcaaaaacaccttcttcgttctggtccgtgtggtggacgagctg
tgtctggtggagatgacggaggacatcctgaagcagctgatggacctggtgttcaggctg
gtgtgtaacggcgagctgagcctggcccgcgtgctccgcaagaacatcctggacaaggtg
gagcagaggaagttgctacgctacaccaactcccttaaaccactggccgcgcgaggtgtc
gctgccagaccagggaccctgcatgatttccgcagtcacgagattgctgaccagctaact
ctcctggacgcggagctcttctacaaaattgagatccctgaggtgttgctttgggctaag
gagcagaacgaggaaaagagtcccaacctcacacaattcacagagcactttaacaacatg
tcatactgggtccgctccataatcattctgcaggagaaagcccaggaccgagaaaagctc
ctccttaaattcatcaaaataatgaagcacttacggaagctaaataatttcaactcgtat
ttggcaatattatctgccttggattcagctcccatccgaagactggaatggcagaaaaca
acctcagagggcctagaggaatactgcacgttgatagacagttcctcgtcgttccgggcc
taccgagcggcactggcagacgtggagcccccatgtataccatatctgggacttatcctc
caggacttaacctttgtccatctgggcaaccctgacctcatcaatgggaaggtcaacttc
tcaaagcgctggcagcagttcaatatcctggacagcatgaggcgcttccagcaagtgcat
tatgatctgaaacacaacgacgacatcgtctcctttttcaatgacttcagcgaccacctg
gcagaggaggctctgtgggagctgtctctaaagatcaaacctcggaacattacgcggcgc
aaaacagagcgcgaagagaagacatag
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