Salmo salar (Atlantic salmon): 106580134
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Entry
106580134 CDS
T04363
Name
(RefSeq) myocyte-specific enhancer factor 2C-like
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106580134
04371 Apelin signaling pathway
106580134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106580134
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
106580134
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
106580134
NCBI-ProteinID:
XP_014016318
UniProt:
A0A1S3NM58
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Position
ssa20:complement(11053670..11150757)
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AA seq
478 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCQGVPPSNYEMPVSIPVSNQNSLIYSHPGGSLGNHNLLPLAHHMQRN
SMSPGVTHRPASAGGLMGADLTTGAVTSAGNGYGNHHRNSPGLLASPGSMNKSMQAKSPP
PMNLGMNNRKPDLRVLIPPGAKNNMPSMSEDVNLLLNQRINNSQSAQSLATPVVSVATPT
LPGQGMGGYPSAISTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQHSA
LSQLGNCNSNHLCQSSNLSLPSAQSLHIKSEPVSPPRDRTSSTPLCYGIHQQHNPSSRQD
SGHSPVDSLSSCSSSHEGSDRDEHRNEFHSPLGLSRPAMDERESPSVKRVRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgaca
tttacgaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagtaccaacaagctgttccagtatgccagcacc
gacatggacaaggtgctgctcaagtacacggagtacaacgagccccacgagagcaggacc
aactctgatatcgtggagacgttgagaaagaagggtctaaacggttgtgacagccctgac
cccgacgcagacgactcggtcggccacagccccgagtctgaggacaagtacaggaaaata
aatgaagacattgatctgatgatcagcagacagagactgtgtcagggtgtgcccccctcc
aactacgagatgccggtgtccatccccgttagcaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcccctggcacaccacatgcagaggaac
agcatgtcccccggtgtcacacacagacctgccagtgcaggtggcctcatgggtgctgac
ctcaccactggtgcggttaccagtgctggcaacggctacgggaaccaccaccgtaactcg
cccggtctgctggcctctccgggtagcatgaacaagagcatgcaggccaagtctccccca
cccatgaacctgggtatgaacaaccgcaagccagacctgcgtgtgctcatcccccctgga
gccaagaacaacatgccctccatgtctgaggatgtcaatctgctattgaaccagagaata
aacaactcccagtcagcacagtcattggccacccctgtggtttcagtagcaacgcccacc
ctaccaggacaaggcatgggcggttacccatcagccatctccacttcatacggtactgaa
tactcgctgagcagtgcagacctatcctccctgtccggctttaacagtggtagctccctc
cacctgggctccatgagcggttggcaacaacaacacctccagaacatgcagcattcggcc
ctcagtcagctaggaaattgcaatagcaatcacttatgtcagagttcaaatctctccctg
ccttctgctcaaagcctgcacatcaagtccgaacctgtttctcctcctagagatcgcacc
agtagcacaccgttgtgctacggcatccatcagcaacataacccgtcgtcccgccaggac
tcgggccactcccctgtcgacagcctgagcagctgcagcagctcccacgagggcagcgac
cgggacgagcacaggaacgagttccactctccactgggactgtctcggcccgccatggac
gagcgcgagagtccctcggtcaaacgtgtgcgcctgtccgaagggtgggccacatga
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