Salmo salar (Atlantic salmon): 106580306
Help
Entry
106580306 CDS
T04363
Symbol
usp30
Name
(RefSeq) ubiquitin specific peptidase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106580306 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106580306 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106580306 (usp30)
04121 Ubiquitin system [BR:
sasa04121
]
106580306 (usp30)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106580306 (usp30)
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106580306 (usp30)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
106580306 (usp30)
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106580306 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
106580306
NCBI-ProteinID:
XP_014016642
UniProt:
A0A1S3NMI7
LinkDB
All DBs
Position
ssa20:27955553..27964493
Genome browser
AA seq
504 aa
AA seq
DB search
MPWCRPATSEKLIREFLYSGTIVRNKIMKNWGVIGGIAAAMAAGVYVLWGPITDSKKRKK
GMVPGLLNLGNTCFMNSLLQGLAACPSFVKWLEEFTSCKGVSEGEPEKDPELSTTLLQLL
KALSNDNTGEEDVLDAGRLLEVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVT
HLFDIQSLESLPDIDDKTLSCKSRGPLHPLRSPWKFPHPFHGRLTSNMACKRCEQQSPVR
YDSFDSLSLSIPSPQWGWPISLDHCLQHFISSETIKEVECENCTKLQQGALVNGHVLESQ
RTTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQISEYLSMDRYKHRATVQRLQ
RINCTPKTIKAEDSGEAADKTPPNGKDIEHHNKNKPLSNGTCSSVFLHSPGLNPQVNLTY
DYSSSEYHFQLMAVLVHHGDMHSGHFVTYRRCPPSPRSPSPFSSQWLWVSDDSVRKASLQ
EVLSSNAYLLFYERVRRLRLLLEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggtgcagaccagcgacatctgaaaagcttattcgggagttcctgtactctggt
accattgtcaggaacaaaattatgaaaaactggggagtcattggtggaatagcggctgcc
atggctgctggagtgtatgttctatggggtccaattacggacagcaagaaaaggaagaaa
ggcatggtaccaggcctgctgaacctgggaaacacctgcttcatgaactctctactccag
ggcctggcagcctgcccttccttcgtcaagtggctggaggagttcactagctgcaaaggt
gtgtcagagggcgagccagagaaggaccctgaactttccacaactctcctgcagcttctc
aaagcactgtcaaacgacaacactggggaggaggatgtgctggatgcagggcgtctgctg
gaggtcctcagactctacaggtggcacatcagttcctttgaggaacaggatgcccatgag
ctcttccatgtcctcacctcttccctggaggaggagcgagaccgacagcccaaagtcacc
cacctctttgacattcagtcccttgagagtctcccagatatagatgataagaccttaagc
tgcaagagtcgaggccctcttcatcctttacgaagtccttggaagtttccacatcctttc
catggccgcctaacaagcaatatggcttgcaagcgttgcgaacaacagagtccagtgcga
tatgactctttcgacagcctctccttatccatcccttcgccgcaatggggctggcctatc
tctttggatcactgtctccagcacttcatctcttcagagaccattaaagaggtggagtgt
gaaaactgcaccaagcttcaacaaggcgccttagtgaatgggcatgtcctggaaagccag
aggacaaccttcatcaaacagcttaaactgggaaagctcccacagtgtctctgtattcac
ctgcagagactgacatggtctaatgagggtacgcccataaagagacaggaacatgtccag
atctcagagtacctgtctatggaccgctacaaacaccgagcaaccgttcagaggctccag
cgcattaactgtactcccaaaaccattaaagcagaggattcaggagaggctgcagataag
acccctcccaatggcaaagatatagaacaccataacaagaacaagcctctgtccaatgga
acctgttcgtctgtctttctccattctcctgggttgaacccacaggtcaacctcacatat
gactacagctcctcagaataccactttcaactgatggctgtgttggttcaccatggtgac
atgcactcaggacactttgtcacttaccgccgctgccctccctcgccccgcagcccctct
ccattcagctcccagtggctgtgggtttcagatgactctgtacgcaaggccagtctgcag
gaggtgctgtcctccaacgcctacctactcttctatgagcgggtgagacggctccgtcta
ctgttggaggagtag
DBGET
integrated database retrieval system
