Salmo salar (Atlantic salmon): 106580315
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Entry
106580315 CDS
T04363
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106580315 (sart3)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106580315 (sart3)
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106580315 (sart3)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106580315 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
106580315
NCBI-ProteinID:
XP_014016666
UniProt:
A0A1S3NN78
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All DBs
Position
ssa20:complement(27691545..27711410)
Genome browser
AA seq
957 aa
AA seq
DB search
MAATGNAEETQLQEMEEEAGMEREMDSDEEEGMGIENSDDEEDDSSEDDKENEAEIQRLE
EQLSINAFDYNCHVDLIKLLRQEGELPPLRKARQKMSELFPLTEEIWLDWLKDEIRLTEE
EPNREKVYELFEMAVKDYICPEIWLEYAQYSIGGMGLPGGMEKVRSIFERALTAVGLHMT
KGATVWEAYREFENVILATVQPPLGSVPTCEQQELLNAQLERIHTLFRRQLAIPLMDMEG
TYAEYEEWSDQGVSDTVSQKYKRALQQMEKSKPYEETLMAAEPPKLAEYQTYIDYEQMEG
DPARIQIIFERALAENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKN
YLLALERHGADHQTISDIFEKALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNIQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTADYPEHVCEVLLTFERVEG
SLEDWDAAVQKTEIRLNRVNEQRAKVAEKEAHLVRQEEEKTEQRRRAKADKKNQKKGQKG
SRPGEKRKAEDEDNEDEWGEESEQPPKRHRGEGNHGSFRGGGAEEFMETESGLFGRRAPP
CRRQEPPGAKRGQQIAPDTVRKTQEDNPEQRKDDCSVFISNLAFSMEDPEKRLKELFESC
GPVQSVRPVYAAKGFRGYCYVQFEGKTSVPEALKMDRREVDGRPMFVSPCVDKNKNPDFK
VFKYNTNLEKHKIFISGLPFSCTKEQLEELCKDQGTIKDIRLVTNRSGKPKGLAYVEFED
EAQASQAVLKLDGTVLQEHTLSVAISNPPRRNAADKPDFSRPMGAMMPRAMVYGSRGKGR
TQLSLIPRSLHRQTGSESKAENGTAPKPTGGASGDAGFEAQAKPMSNSDFAKFLLRK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggggaacgcagaagagacgcagttgcaagagatggaggaagaggcaggg
atggaaagagaaatggattcagatgaagaggagggtatgggaatcgaaaattcagacgat
gaagaagacgattcgtcagaagatgataaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgactacaactgtcatgtggacctcataaaactcctg
aggcaggagggggaactgcctccactgcgtaaggcaaggcagaagatgagtgagctcttc
ccactgactgaagagatatggctggactggctcaaggatgagatccgcctaaccgaggag
gagccgaaccgggagaaagtctacgagctctttgagatggctgtgaaagattatatctgc
cctgaaatctggctggagtatgcccagtactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtccatcttcgagagagccctgacagccgtggggttgcacatgacc
aagggggcgactgtgtgggaggcctacagggagtttgagaacgtcatactggcaactgtt
cagcctccccttggcagtgtccccacctgcgagcagcaggagcttctgaacgctcagctc
gaacgcatccacactctgttccgccgccagctggccatccccttaatggacatggaagga
acatatgcagagtatgaggagtggtctgaccagggggtgtctgatacagtctcccagaag
tacaagcgggccctgcaacagatggagaagagcaagccttatgaggagactctgatggca
gccgagccacccaagctagcagaatatcagacctacattgactatgagcaaatggagggt
gacccggcacggatccagatcatctttgagcgggcactggcagagaactgcctggtacca
gacatgtgggccaagtacaccaagtacctggatcgtcaactaaaaatcaaagacctggtc
ctgtcctctcacgaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgcttgccctggagaggcatggggccgaccaccaaactatatcagacatttttgaa
aaggccctgaatgccggattcatacaagccacagattatgttaatatctgggaagcatac
cttgattacctgaggaggcgcgtcgatttcagcaaaggtgaaagcaccttaacattggag
tcgagcagagagctggaggagctgcgggcagccttcacccgttctctagactatatgaaa
caggacgtggaagagagatttagtgaaagtggagacccttcctgtaccatcatgcaggtc
tgggcaaagatagaggccctgcattgtaagaacattcagaaagctagagaactgtgggac
agcatcatgacaaaagggaatgccaaattcgccaacatgtggctggagtactataacctg
gagaggtcgtacggagatgctctccactgcaggaaagccctccacagggccgtccagtgt
accgccgactaccctgagcatgtgtgtgaggtactgctcacctttgagagggttgagggg
tctctggaggactgggatgcagcggtgcagaagactgagataaggctgaacagagtaaac
gagcagagggccaaggtggcagagaaagaggcccatctggtccgacaggaagaggagaag
actgaacagcggcggagggccaaggcagacaagaagaaccaaaagaagggacagaaaggc
agcaggcctggggagaagaggaaggcagaggatgaggataacgaagatgagtggggggag
gaatcggagcaacctccaaagaggcaccgaggggagggcaaccatggcagcttcaggggg
ggaggtgctgaggagttcatggagacagagagtggactgtttgggaggagagccccccct
tgccgcagacaggaaccccctggtgctaagaggggccagcagatagcaccagacaccgta
cggaagacccaggaagacaaccccgaacaacgcaaggatgactgcagtgtgtttatcagc
aacctggccttcagcatggaggatccagagaagagactgaaggagttgtttgagtcctgt
ggtcctgtacagtcagtgcgccccgtctatgctgccaagggcttcagagggtactgctac
gtacagtttgagggcaagacgtccgtgcccgaggccctgaagatggaccggcgtgaggtc
gacggcaggccaatgttcgtatcgccctgtgtggataaaaacaagaaccctgattttaag
gtgtttaagtacaacacaaacctggagaaacacaagatctttatctcgggcctgcccttt
tcctgcaccaaggagcagctggaggagctgtgcaaggatcaaggcaccatcaaagacatc
cgcctggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtggagtttgaagat
gaggctcaggcctcccaggccgtgctgaagttggatggcacggtactacaggaacacaca
ctctctgttgccattagcaacccacctcgcagaaatgcagccgacaagcctgacttcagc
aggcccatgggagccatgatgccccgggctatggtctatggatcgaggggaaaagggcga
acccaactctcactaatccctcgttccctacatcggcagactggatcagaaagtaaagca
gaaaatgggactgcacctaaacccacagggggtgcatccggagacgctgggtttgaagca
caggccaagcccatgtccaattcagactttgccaaatttcttctcagaaagtga
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integrated database retrieval system
